Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0960 |
Symbol | |
ID | 3724101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1130964 |
End bp | 1131698 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637750551 |
Product | hypothetical protein |
Protein accession | YP_356383 |
Protein GI | 77918568 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACATT TGGTCTTTCG CCTCTATGGG CCGCTTGCGG CCTGGGGAGA GATTGCCGTT GGCGAATCGC GCCACTCCGC GGTTTATCCC AGCAAGTCGG CGTTGTTGGG ATTGTTGGCT GCGGCGCTTG GCATTCGGCG TGATGAAGAG GAGCAACAGG CTGCATTGGC TGCCGGGTAT CTATTTGCCG TCAAAGTATT GCGAACCGGT TCGTTGCTAA GGGACTATCA TACGACACAA GTTCCGGATT CAGCAGGAAA GGTGGTTTAT CGCACCCGTC GCGAAGAACT GATACGCGGT AAAGCACGTC TCGGAACGAT CCTTTCCAGC CGTGAATATC GGTGTGATTC TATGGCCTTG GTCGCTGTCA GGGCTAATGC AAATGCTCCT TTTACTTTGG AAACAATTCG AGAGAAATTG TTGAAACCGG CATTCCTTCT TTACCTTGGG CGGAAATCCT GTCCTTTGGC TGCTCCCCTT GATCCGGTTG TCAGCGATTG GGACAGTTTC GGACAAGCTC TGGATGAAGC CGAACTCAAA GCTTTGATGG TAGAGCCCGA CGATGAACAG CGATGGATAC CTGTGGAATA CCAGACCCGT TATTACTGGG AGGGTGAAGA CAGCTCTCTG AAAGCGCAGC AGGTATTAAC CCGCCATGAC CAGCCTTTCT CTCGGAGACG TTGGCAATTT TCTCAGCGTG CGGAAAACCT GTGTATCGGG AAGGGAGAGG GCTGA
|
Protein sequence | MKHLVFRLYG PLAAWGEIAV GESRHSAVYP SKSALLGLLA AALGIRRDEE EQQAALAAGY LFAVKVLRTG SLLRDYHTTQ VPDSAGKVVY RTRREELIRG KARLGTILSS REYRCDSMAL VAVRANANAP FTLETIREKL LKPAFLLYLG RKSCPLAAPL DPVVSDWDSF GQALDEAELK ALMVEPDDEQ RWIPVEYQTR YYWEGEDSSL KAQQVLTRHD QPFSRRRWQF SQRAENLCIG KGEG
|
| |