Gene Pcar_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0960 
Symbol 
ID3724101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1130964 
End bp1131698 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID637750551 
Producthypothetical protein 
Protein accessionYP_356383 
Protein GI77918568 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT TGGTCTTTCG CCTCTATGGG CCGCTTGCGG CCTGGGGAGA GATTGCCGTT 
GGCGAATCGC GCCACTCCGC GGTTTATCCC AGCAAGTCGG CGTTGTTGGG ATTGTTGGCT
GCGGCGCTTG GCATTCGGCG TGATGAAGAG GAGCAACAGG CTGCATTGGC TGCCGGGTAT
CTATTTGCCG TCAAAGTATT GCGAACCGGT TCGTTGCTAA GGGACTATCA TACGACACAA
GTTCCGGATT CAGCAGGAAA GGTGGTTTAT CGCACCCGTC GCGAAGAACT GATACGCGGT
AAAGCACGTC TCGGAACGAT CCTTTCCAGC CGTGAATATC GGTGTGATTC TATGGCCTTG
GTCGCTGTCA GGGCTAATGC AAATGCTCCT TTTACTTTGG AAACAATTCG AGAGAAATTG
TTGAAACCGG CATTCCTTCT TTACCTTGGG CGGAAATCCT GTCCTTTGGC TGCTCCCCTT
GATCCGGTTG TCAGCGATTG GGACAGTTTC GGACAAGCTC TGGATGAAGC CGAACTCAAA
GCTTTGATGG TAGAGCCCGA CGATGAACAG CGATGGATAC CTGTGGAATA CCAGACCCGT
TATTACTGGG AGGGTGAAGA CAGCTCTCTG AAAGCGCAGC AGGTATTAAC CCGCCATGAC
CAGCCTTTCT CTCGGAGACG TTGGCAATTT TCTCAGCGTG CGGAAAACCT GTGTATCGGG
AAGGGAGAGG GCTGA
 
Protein sequence
MKHLVFRLYG PLAAWGEIAV GESRHSAVYP SKSALLGLLA AALGIRRDEE EQQAALAAGY 
LFAVKVLRTG SLLRDYHTTQ VPDSAGKVVY RTRREELIRG KARLGTILSS REYRCDSMAL
VAVRANANAP FTLETIREKL LKPAFLLYLG RKSCPLAAPL DPVVSDWDSF GQALDEAELK
ALMVEPDDEQ RWIPVEYQTR YYWEGEDSSL KAQQVLTRHD QPFSRRRWQF SQRAENLCIG
KGEG