Gene Pcar_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0927 
Symbol 
ID3724146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp1095223 
End bp1095873 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content58% 
IMG OID637750518 
ProductABC-type transport system, ATPase component 
Protein accessionYP_356350 
Protein GI77918535 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCCCT TTTTATCGTT AAACTCCATC GAAATGCGTT ACAACAACCA TGTGGCTTTA 
CAGCTCGAAG AACTCGAGTT CGAACCACAG AAGATCTATT CCCTGGTCGG ATCCAACGGT 
TGCGGCAAAA GCACCCTGCT GCAGATCATC GCCCTGCTGC TCAAACCGAC CTGCGGCCAG 
ATGATATTCG AGGGCCAGAA GGTTGTCTGG AAAAAACACG ATCTTCAGCA GATGCGCCTG 
AATATCACCC TGGTGCACCA GTCCCCCTAC CTGTTCAGCC GTTCGGTGCG CCACAACATC 
GCCTACGGTC TGAAACTGCG CGGCATACAC GCTAAGGAAC AACACCAGTT GGTTCATGAA 
GCGCTTGAAA TCGTCGGCCT TGACGGCTTC GGCCGGCGTA ACGCCCGGGA GCTGTCCGGC 
GGCGAACAAC AGCGTGTAGC CATCGCCCGC GCACTGGTAC TGCGCCCCCG CCTGCTGCTA 
CTGGACGAAC CGACCTCCAA CATGGACCGG GCCAGCATCG ATGCCTTTGA TCAACTGCTG 
CCGACCCTGG TCGACCAGGG CATGACCATC ATCCAGGCCA CCCACTCCCC GGATCAACCG 
GAAAGGCTGC GCAGCACCAT CATCCGCATG GAAGACGGTC GTTTGCTCTG A
 
Protein sequence
MTPFLSLNSI EMRYNNHVAL QLEELEFEPQ KIYSLVGSNG CGKSTLLQII ALLLKPTCGQ 
MIFEGQKVVW KKHDLQQMRL NITLVHQSPY LFSRSVRHNI AYGLKLRGIH AKEQHQLVHE 
ALEIVGLDGF GRRNARELSG GEQQRVAIAR ALVLRPRLLL LDEPTSNMDR ASIDAFDQLL 
PTLVDQGMTI IQATHSPDQP ERLRSTIIRM EDGRLL