| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0850 |
|---|
| Symbol | |
|---|
| ID | 3722848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1003678 |
|---|
| End bp | 1004187 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637750444 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_356276 |
|---|
| Protein GI | 77918461 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.0258066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCA AACTGGCCAG ATACTTCATC ATTACCGCCC TGTGTTTCCT GCTGCTCAGC
TGTCTCGAAG GGGTGATGTT TCCCACCAAG TTTCAGCTCC AGTCCCTGTA TAAGGCCCTG
CTGCATGTTC CCCCCGGCAA GCTCAAAGCC TTTTTCGGCT ATTTCGTGAC CAAGATCCAC
ACCCATGTGA GCCTGATCGG CTGGGTCAGT TCGGCGCTCA TGGGCATCCT GTACCATCTC
GCCCCGCAGA TCAGCGGACG GGAACGCTAT CTGCGCTGGG TCGGTTACGG TAACTGGGGC
TGTCATGTCC TCGGCCTGTT GCTGCTCACG GCCGGCTTCC ACCTTATCGG GGTGTTCGGC
CTGGCTTCCG GTTTCGATGC CGGGTCGCCC GAATTCCGCG CGGTGGCGGC CCCCTACAGG
GCCCTGGTGG CGGCGGGCGG GGTACTGGTC ACCGTATCGG CCCTGCTGTT CAGCGGCAAC
ATAATGCGCA CCCTGCTGGC AAGAGACTGA
|
|---|
| Protein sequence | MSSKLARYFI ITALCFLLLS CLEGVMFPTK FQLQSLYKAL LHVPPGKLKA FFGYFVTKIH
THVSLIGWVS SALMGILYHL APQISGRERY LRWVGYGNWG CHVLGLLLLT AGFHLIGVFG
LASGFDAGSP EFRAVAAPYR ALVAAGGVLV TVSALLFSGN IMRTLLARD
|
|---|
| |