Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0784 |
Symbol | |
ID | 3723102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 928223 |
End bp | 928849 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637750379 |
Product | amino acid efflux/transport protein |
Protein accession | YP_356213 |
Protein GI | 77918398 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATCTA CCGAAACGAT AATGACCTTT TTCAGCGTCT CTGTTTTACT GGGCCTTGCA CCAGGCCCTG ACAACATCTT TGTTCTGACG CAGTCTGCTT TGCGTGGAAA GGGGCCGGGA CTCATTGTTA TGCTCGGTTT GTGTACTGGG CTTATTGCAC ATACTATCGC TGTTTCCCTT GGAGTCGCTA TAATTTTTCA AACATCCATT CTTGCTTTTT CAGTTCTCAA ATTACTGGGT GCGGCTTATC TCGTTTATCT CGCGTGGCAA GCCTTTCGAG CCTCAGCAGA GACTATCCAG GGCGGGCCGG AAGGAATTGT CAGTTACCGG AAGTTGTATG CTCGTGGCAT CATCATGAAC ATCACAAATC CAAAAGTATC CATTTTTTTT CTGGCCTTTC TTCCACAATT TACCGAACCA ACCAAAGGTC CCGTAGCTGT CCAACTTGTT CTGCTTGGGG GATTATTCAT TCTAGCGACA ATACTGGTGT TCGGAGGCAT TGCGCTTCTT GCAGGTACCC TTGGTGGCTT GCTTAAGCGC TCGGACAGAA CTCAGAACAT CCTGAATAAA ATTGCCGGTA CTGTTTTTAT GGGCCTCGCA CTGAAACTTG CTACGATAAG GCAGTAA
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Protein sequence | MLSTETIMTF FSVSVLLGLA PGPDNIFVLT QSALRGKGPG LIVMLGLCTG LIAHTIAVSL GVAIIFQTSI LAFSVLKLLG AAYLVYLAWQ AFRASAETIQ GGPEGIVSYR KLYARGIIMN ITNPKVSIFF LAFLPQFTEP TKGPVAVQLV LLGGLFILAT ILVFGGIALL AGTLGGLLKR SDRTQNILNK IAGTVFMGLA LKLATIRQ
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