Gene Pcar_0729 details

Gene Information

• Locus tag: Pcar_0729
• Symbol: rplQ
• ID: 3722935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 867431
• End bp: 867898
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637750320
• Product: 50S ribosomal protein L17
• Protein accession: YP_356158
• Protein GI: 77918343
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 56
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCACA ATAAATCCGG TAGACGGCTC GGACGCAACT CCAGCCATCG CGCTGCTATG 
ATGCGCAACA TGGTGACTTC GTTGCTCGAG CATGAAAAAA TCACGACGAC CGATGCCCGC 
GCCAAGGAGC TTCGCAAAGT TGTTGATCGT ATGATCACCC TCGGCAAGCG AGGCGACTTG 
CATGCTCGAC GCCAGGCCAT CAAGGTGATT CAGGATCGTA AGGTTGTCGG CAAACTCTTT 
GAGTTGATCG CTCCCCGGTA CACTGACCGT CCCGGCGGAT ATACAAGGAT CATCAAACTC 
GGTAACCGCC TTGGTGATAA TGCTCCGCAG GTCATTATCG AGCTGGTCGA AGAGGAATTT 
ACCCCGCGCG TGCGTAAGGC TGCCGACGAC AAGGCTGTTG CCGAGTCTGT CGCGACCGAA 
GTTGCCGAGG CTACCGAAGC TGCTGCGGAT ACGAAACAGG CCGAATAA 

 

Protein sequence

MRHNKSGRRL GRNSSHRAAM MRNMVTSLLE HEKITTTDAR AKELRKVVDR MITLGKRGDL 
HARRQAIKVI QDRKVVGKLF ELIAPRYTDR PGGYTRIIKL GNRLGDNAPQ VIIELVEEEF 
TPRVRKAADD KAVAESVATE VAEATEAAAD TKQAE