| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0575 |
|---|
| Symbol | |
|---|
| ID | 3723230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 698255 |
|---|
| End bp | 699331 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637750161 |
|---|
| Product | isocitrate/isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_356005 |
|---|
| Protein GI | 77918190 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.879672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGA CAATAACTGT TCTGGAAGGC GATCAGACCG GCCAGGAACT GCTTGAAGAA
GCTTTACGCA TTCTGGATCC AGCGGTCACC GGAGTGACCG TTACGTTCAA GCACTTCGAT
CTCAGTCTGG ACAACCGTCG CGCAACAAAA AACAAAGTCG TATACGAAGC TGCCGAGTCC
ATGAAATCCA CCGGGCTGGG GCTTAAAGCC GCCACCATTA CGCCCGCCAT CAAAGGCGAT
GTCGGCAGCC CGAATGCCAT TCTTCGCGAT CAGGTCGATG GCACGGTCAT CGTCCGCACC
GGTCGGCGCA TTCCCGGAAT CCGCCCCTCC GGCGGTGCTT ACGCGCCGAT TTCGGTGGTC
CGCATGGCCG TCGGAGGCTC TTACGGCGCC CAGGAATCCC GCCAAGGAAC CGGTTTGGAT
GAAGTCGCTT CCCGCACCGA ATCGATCACC CGTCGCAACT GCCATGCCGT CGCCGAATTT
GCCTTCCGCC ATGCTCAGAA ACTTGGCGTC AAGGTTTTCG GCGGGCCTAA ATTCACGGTC
AGTCCGGTTT ACGAGGGCAT GCTCAAAGAG GAGATGGATG CTGCCGCCGA ACGTTTTCCC
GACGTGGTCT ACGAGCCGCA GCTTATCGAC GCCACCTATG CCTTGCTGTT GACCAACGGT
GGCGACGGCA TGGTGATACC GTCCCTGAAC CGGGACGGCG ACTGCCTGAG CGATTTCGTA
CTGCAGATGT TCGGTTCCAT CGCCGGCGCC GAGTCCCTGC TGCTATCGTT CGATGAGTCC
TGGACCCCCG CGGTAGTGAT GGCGGAAGCC CCTCACGGTA CGGCCCCATC ACTGCAGGGG
AAAAATATCG CCAACCCGAT GGCCATGATT CTGGCCGGCG GGGCGCTGTT GCGATACATC
AACCATCCTG ACGCTCGCCG CGCTGCCAGA GCCATTTCCG AGAGCGTTTT TGAAGCCGTG
CAGCAGGGCT TCAGTACTCC CGACCTGGGA GGAAGTTGTA CGACCACCGA ATTCACCGAC
GAGGTCATTC GGCGAGTCGC GTCCAAACTG GAAGTGTGGC AAACTCTGGG TAGTTAA
|
|---|
| Protein sequence | MTPTITVLEG DQTGQELLEE ALRILDPAVT GVTVTFKHFD LSLDNRRATK NKVVYEAAES
MKSTGLGLKA ATITPAIKGD VGSPNAILRD QVDGTVIVRT GRRIPGIRPS GGAYAPISVV
RMAVGGSYGA QESRQGTGLD EVASRTESIT RRNCHAVAEF AFRHAQKLGV KVFGGPKFTV
SPVYEGMLKE EMDAAAERFP DVVYEPQLID ATYALLLTNG GDGMVIPSLN RDGDCLSDFV
LQMFGSIAGA ESLLLSFDES WTPAVVMAEA PHGTAPSLQG KNIANPMAMI LAGGALLRYI
NHPDARRAAR AISESVFEAV QQGFSTPDLG GSCTTTEFTD EVIRRVASKL EVWQTLGS
|
|---|
| |