Gene Pcar_0553 details

Gene Information

• Locus tag: Pcar_0553
• Symbol: uvrC
• ID: 3723458
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 674991
• End bp: 676829
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637750139
• Product: excinuclease ABC subunit C
• Protein accession: YP_355983
• Protein GI: 77918168
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000000014331
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACCT TTGAAGCCGC CAAATATCCC ACCGCCAGCG GTGTTTATCT GATGAAAGGC 
GAAGCGGGGA CGGTCTTTTA TGTCGGTAAG GCCAAGAACC TTCGCAGTCG TTTGCGCAGT 
TATTTTTCCG AACATGGGGA CAATCGTCCG CAGATCCGTT TTTTGCTCAA ACGGGTACAT 
GACATCGAAA CCATCGTGAC GGATACGGAA AAAGAGGCAC TGATCCTCGA AAATACTCTC 
ATAAAAAAGT ACCGGCCCCG CTATAACATC AACCTGCGGG ACGATAAGAC GTATCTCTCG 
CTGCGTCTCG ACCCGCGGCA GGAATTTCCC ATGTTGCAGC TGGTGCGGCG GGTGCGGCGC 
GACGGTGCTC TCTATTTCGG ACCTTACGCG TCGTCGACGG CGGTGCGCGC CACATTGCAG 
GAGATTTATC GGATATTTCC GTTGCGCAGG CATCCCTGGG AATCCTGTCG CAGCCGCTCC 
CGTCCCTGTC TCTATTATCA GATCGGGCAG TGCAGCGCAC CCTGCCACGG CAAGATCAGC 
GCGGAGGATT ACCAGCGCCT GGTCGATGGC GCACTGGCTC TGTTGGCGGG GCGGGAATCG 
GAAGTGGTGG AGTCCCTTCA ACATCAGATG GCCGCCGCGG CCGAGCGCAT GGCGTTTGAG 
GAAGCGGCCC GGTTGCGCGA CCAGTTGCGG GCGATCGAGC AGACGGTCGA GCGGCAGAAG 
GTGGTCGAAG CGGGCGGCGG GGACCAGGAC GTTGTCGGTC TGCATCGCGA AGGGGGAGAG 
GTGGAGCTTG CCATCCTGTT CGTGCGCGAG GGCAAGGTGA TCGATCGTCG CAGCTACAAT 
CTCGAATGGC GTCTGGACGA GGAAGAATTG CTGTCGACGT TTCTGCAGCG ATTTTACGGC 
CGCGATGTCT GCATCCCGGA CCGGGTGTTG TTGCCTTTTC TGCCGGAAGG GAGCGAAGTG 
CTGGCCGAAT GGCTGAGCGA GCAACGGGGT AAAAAAGTAC AAGTGCTGGC GCCTTTGCGT 
GGCACCCGTC GCAAACTGGT GGCCCTGGCC GCGCGCAATG CCGAGGAAAG CTTCAGGGAA 
AGGGGCTCCA GGCGCGAGGC GCGTCAGGGT GTGCTGGAGG AAATTGCCAG GCGCCTGCAT 
CTGACGCGGT TCCCCCATCG TATCGAATGC TTCGATATCT CCAACGTACA GGGGCGCTTC 
AGTGTCGGCA GTATGGCAGT GCTTAGCGAT GGCGAGCCGG ACAAAGGCGC TTATCGGCAT 
TTTCGCATCC GCAGTGTCGA GGGCAGCGAC GATTACGCAT CTCTTTACGA AGTGTTGCGG 
CGTCGCCTGG AGCGCGGTCT GCGCGAAGAA TCGTTGCCGG ATTTCATTCT CATGGATGGC 
GGCAAGGGGC AGCTGAACAT CGTTTGTACC GTGCTGGACG AGCTGAATCT TACCGGGCGC 
ATCGATGTGG CAGGCATCGC CAAAAGCCGG GTGATGGCTA ATGTGCGCGG CAAGGCGGTG 
GAGCGCAGCG AGGAGCGGTT CTTTTTGCCC GGTCGCAAAA ATTCCGTTAA TTTGCGTCAG 
GGCTCGCCGG CATTGTTCAT GCTCGAACGT TTGCGTGATG AGGCCCACCG GTTTGCCATT 
ACCCACCATC GCAAATTACG CCGTCGCAGC ACCCTCGGCT CGGTGCTCGA GGAGATTCCG 
GGGGTCGGTG AAAAACGCAG GAAGGCATTG CTGAAGCATT TCGGCAGCCT TAAGGCCGTT 
CAAGCCGCCA GTCTCGATGA ATTACGGGCC ATGCCCGGCC TGCCGGCCGC TTTGGCGGAA 
CGGATTCATG CGGCTTTTCA GGAGAGGAAA ACCTCGTGA 

 

Protein sequence

MFTFEAAKYP TASGVYLMKG EAGTVFYVGK AKNLRSRLRS YFSEHGDNRP QIRFLLKRVH 
DIETIVTDTE KEALILENTL IKKYRPRYNI NLRDDKTYLS LRLDPRQEFP MLQLVRRVRR 
DGALYFGPYA SSTAVRATLQ EIYRIFPLRR HPWESCRSRS RPCLYYQIGQ CSAPCHGKIS 
AEDYQRLVDG ALALLAGRES EVVESLQHQM AAAAERMAFE EAARLRDQLR AIEQTVERQK 
VVEAGGGDQD VVGLHREGGE VELAILFVRE GKVIDRRSYN LEWRLDEEEL LSTFLQRFYG 
RDVCIPDRVL LPFLPEGSEV LAEWLSEQRG KKVQVLAPLR GTRRKLVALA ARNAEESFRE 
RGSRREARQG VLEEIARRLH LTRFPHRIEC FDISNVQGRF SVGSMAVLSD GEPDKGAYRH 
FRIRSVEGSD DYASLYEVLR RRLERGLREE SLPDFILMDG GKGQLNIVCT VLDELNLTGR 
IDVAGIAKSR VMANVRGKAV ERSEERFFLP GRKNSVNLRQ GSPALFMLER LRDEAHRFAI 
THHRKLRRRS TLGSVLEEIP GVGEKRRKAL LKHFGSLKAV QAASLDELRA MPGLPAALAE 
RIHAAFQERK TS