Gene Pcar_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0477 
Symbol 
ID3722808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp579376 
End bp580569 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content60% 
IMG OID637750063 
Producthypothetical protein 
Protein accessionYP_355907 
Protein GI77918092 
COG category[S] Function unknown 
COG ID[COG3366] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCG CTATGTTACT GCTGCTGGTC GTGTTGACGC TGAACTTAGG ATCAGTCGGC 
TTCGCCTTAC CTGTTGCCGC CGCGGAACAA TCGACAACAA CCGAAGTCGG TGTTTCAAAA
CCTGACAGAA TACAAGCCGA GGGGGAGCGC GGCCGCGCCC TGGAGCAAGC CCGCAGCCAG
GCCAGAAAAA AACCTTCGGC CTACAGCAGC TGGAAACGAA AGCTCCCCTT CTGGCCGCGC
AAGGGCGTGT TGCTTATTGA GCTGGCCCTG ATCATTGCCG CCGGCATCCT CCTTGGCCAG
GTCCTTGAAG TCGCCGGGTG GATCGGCACC CTGTCGGTGC TGGCCTGGCC GTTGATCCGT
CTGGGACGTC TGCCCCGTGC GACGGCGCCG GCCTTCATCA TGGCCTTCCA GTCGGGCGCG
GTGGCCAACA GCATGCTGGT CTCGTATCGG GATCAAGGCG TCATCAACAA CCGCCACCTT
TACACCTCGG TATTGGTGGT GTCCTGCATC TCGCTGTTTG CTCACCTGCC GACCTTTATC
GTGCCTCTCG GTTTCGCTTT CGGTTGGATG GCCACCGGTG CCCTGTTCGG AGTCAGGATG
GCCGCCATCG GCCTGGAAAT CGTGCTGGTG CTGATGGTTT CGAGCTGGCT CAGCCAACGC
TGGAACGAGG ATCGAGACGG TTTCAACATC GCGAGTTCGG CCAATGTCGA TGGCAGGCGA
CTGGAACGAC CGGTTTTCGC CAGTACCGAT TTCTGGAGAA AAGTCTGGAA ACGGTCGCGA
CGCACCATCC GCCGCCTGCT GCTGTACGTG GTCCCGACCT TCGCAGCCAT GGCTCTGCTG
GAACAATACA GGGTTTTCGA CTACCTGGCC GCGTGGCTGC CGAGTGTGTT CAAACCCGCC
TTTTTACCCC CACAGGCCGT GGCCATCATC CCGGCGCAAG CGGTCAATAT GTATAACGGC
GCCATCGCAG CAGCCAATTT CATCGATGCC GGCAGCCTGT CCATCAAGCA GGCCGTCACC
GTTATCCTGC TCGGTTCGGT GATCACCGCG CCCATACGAA CCCTGCGCCA CGCCTTGCCC
ACCTACCTGG CCACCCTCGG CGCCCGGCCC GGCCTGGTGA TGGCGGTCAG TGCGCAGGTG
TTAAGGGTTT GTTTCGTGCT TCTTTGTACC TGGGTGATGA TCGTTGTTTG GTAG
 
Protein sequence
MQRAMLLLLV VLTLNLGSVG FALPVAAAEQ STTTEVGVSK PDRIQAEGER GRALEQARSQ 
ARKKPSAYSS WKRKLPFWPR KGVLLIELAL IIAAGILLGQ VLEVAGWIGT LSVLAWPLIR
LGRLPRATAP AFIMAFQSGA VANSMLVSYR DQGVINNRHL YTSVLVVSCI SLFAHLPTFI
VPLGFAFGWM ATGALFGVRM AAIGLEIVLV LMVSSWLSQR WNEDRDGFNI ASSANVDGRR
LERPVFASTD FWRKVWKRSR RTIRRLLLYV VPTFAAMALL EQYRVFDYLA AWLPSVFKPA
FLPPQAVAII PAQAVNMYNG AIAAANFIDA GSLSIKQAVT VILLGSVITA PIRTLRHALP
TYLATLGARP GLVMAVSAQV LRVCFVLLCT WVMIVVW