| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0450 |
|---|
| Symbol | |
|---|
| ID | 3723433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 549220 |
|---|
| End bp | 550092 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637750036 |
|---|
| Product | VacJ lipoprotein |
|---|
| Protein accession | YP_355880 |
|---|
| Protein GI | 77918065 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 8.48332e-16 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATG TAATGATGTT TTTGCTATTG GCTGCAATTG CGGGGCTATT TTCATCCGGT
TGTGTTTCGG CAGTCAACCA GACCTCCGCT GCTTCCCCTG CCATCGTTGA AGAACCTTCC
ACTGTTCCGT CTGCGGAAGA GACGGCTTCG GTAGTTGCAA CGGAGGACGC TGTCCGGGAA
CCTCAGGTTG ATGCTTCGGC GGAAGACTTC AATGGCGATG ACGATTTTAC CGACGACGAG
GATTTTACCA ACGGTGATGT CGAAACCATC CATATCAGTG ATCCTATCGA GCCACTTAAC
CGTGGTATGT TCTGGGTTAA TGACAAACTC TATTTCTATC TGTTTAAGCC TATAGCTCGG
GGCTATCGGG TGGTTCCCGA ACCGGCTCGC GAATCGGTGT CCAATTTCTT CTCCAATCTC
GGAACCCCGG TGCGCTTCGC CAATTCGCTG TTGCAACTCA AATTCGAGGA TGCCGGCACA
GAATTGGGGC GTCTGATTAT CAATTCGACT TTGGGGCTCG CCGGGCTTTT CGATCCGGCC
AAGTCCTGGT TCGATCTCGA TAAGAAGGAA GAAGATTTCG GTCAGACCCT TGGTAGTTAC
GGCGTCGGTT CGGGGTTTTA TATCGTATGG CCGATTCTCG GGCCCTCGAA CGCTCGGGAT
ACGGTAGGTA TGGTCGGCGA TTTTTTCATG GATCCTCTGC ACTATGTCGA AATGAAACCC
CTTGAGCGCG TCGGGTTGAC CGCCGTGGAT AAGGAAACCG CCCTTTCGCT GGATAAGGAC
ACCTACGAAA GTGTAAAACA GGAAGCCCTT GATCCCTATC TGTACGTCCG GAATGCCTAT
GAGCAATATC GGGACGGCAA AATCGATAAA TAA
|
|---|
| Protein sequence | MRHVMMFLLL AAIAGLFSSG CVSAVNQTSA ASPAIVEEPS TVPSAEETAS VVATEDAVRE
PQVDASAEDF NGDDDFTDDE DFTNGDVETI HISDPIEPLN RGMFWVNDKL YFYLFKPIAR
GYRVVPEPAR ESVSNFFSNL GTPVRFANSL LQLKFEDAGT ELGRLIINST LGLAGLFDPA
KSWFDLDKKE EDFGQTLGSY GVGSGFYIVW PILGPSNARD TVGMVGDFFM DPLHYVEMKP
LERVGLTAVD KETALSLDKD TYESVKQEAL DPYLYVRNAY EQYRDGKIDK
|
|---|
| |