Gene Pcar_0449 details

Gene Information

• Locus tag: Pcar_0449
• ID: 3723432
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 548755
• End bp: 549201
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637750035
• Product: ABC-type transport system protein
• Protein accession: YP_355879
• Protein GI: 77918064
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 2.58514e-16
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGT TTAACGTTGA GATGGCTGTC GGAATCTTTC TGGTAGCCGG CTTCATCTGT 
TTCGCCTATC TTTCCGTAAA GCTTGGCGAT GTCGATTGGT TCGGTGATAA GACCTATGCC 
ATAAGTGCCC GGTTCGGCTC GGTTTCCGGC CTCAAGGAAG GGGCCGTGGT CGAGTTGGCC 
GGTGTCAAGA TCGGGACCGT CTCGCGGATC ACCCTCGATC CCGAAAAATA CGAGGCGGTG 
TTGGGTATGG ATATCGATGC CAAGGTGCAG TTGCAGGAGG ACAGTATCGC TTCCATCCGC 
ACCTCCGGTA TTATCGGCGA TAAGTATGTC GAGGTGTCAC CCGGCGGTAT GGAGGATTAT 
ATCCAGCCCG GCGGTGAAAT CTATGAGACC GAGTCTGCGG TCAATATCGA AAAACTGGTA 
AGTAAGTATA TTTTCGAGAA AAAATAA 

 

Protein sequence

MKRFNVEMAV GIFLVAGFIC FAYLSVKLGD VDWFGDKTYA ISARFGSVSG LKEGAVVELA 
GVKIGTVSRI TLDPEKYEAV LGMDIDAKVQ LQEDSIASIR TSGIIGDKYV EVSPGGMEDY 
IQPGGEIYET ESAVNIEKLV SKYIFEKK