Gene Pcar_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0440 
Symbol 
ID3723153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp535655 
End bp536266 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content50% 
IMG OID637750026 
ProductTetR/AcrR family transcriptional regulator 
Protein accessionYP_355870 
Protein GI77918055 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACTG CTGCGTTAAA GGTAGACGAT AAACAGGCGT TGCGCGAAAC CATTTTGCAG 
GCGGCCCAGG GTCTCTTCCT GGAGGAGGGG TTCGAACAAT TTTCCATGCG ACGTCTGGCC 
CGCAAGGTCG GTTATTCACC AACGACCTTG TATATCTATT TTCGGGACAA GCAGGATATC 
ATTTTTTCCC TCTGCGAAGA GTTGTTTGAT CACTACCTGA CCGAATTGCA GCGGGTTGCC 
GAAACCGAAG TCGCTCCGCT TGAACGTCTC AAGAAATCGT TTTTATTGAG TATCGACTTC 
GGCTGCAGTC ATCAAGACCA TTATCGCGTG GCTTTTTTTT CGGATGCTCC GGTATACGGC 
TCTCCCGACG AGTTTATGAC CAGGGATTCT CTGGCGCGGA GATCCTATCT GTTTGTGCGG 
CAGGTGGTGA TCGATTGTAT AACCTGCGGC GTGTTTCGCC CCGTCGATCC AGAATTGGTA 
ACACAGGCCT TTCTGACAGC TTCCCATGGC GTTATTACGG CAAAAATTTT CTGGAAGGAT 
TTTCCCTTGT TGCCTTCAGA GGCTTTGGGG GAGACCTTGT TGCGCGGTTT GGTTAAGGAA 
TTTCTGGCCT GA
 
Protein sequence
MQTAALKVDD KQALRETILQ AAQGLFLEEG FEQFSMRRLA RKVGYSPTTL YIYFRDKQDI 
IFSLCEELFD HYLTELQRVA ETEVAPLERL KKSFLLSIDF GCSHQDHYRV AFFSDAPVYG 
SPDEFMTRDS LARRSYLFVR QVVIDCITCG VFRPVDPELV TQAFLTASHG VITAKIFWKD 
FPLLPSEALG ETLLRGLVKE FLA