| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0427 |
|---|
| Symbol | |
|---|
| ID | 3723082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 519800 |
|---|
| End bp | 520267 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637750013 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_355857 |
|---|
| Protein GI | 77918042 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2143] Thioredoxin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.00405131 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTA TCAAGCTCAT ACTTGTCGCC CTGACAGCTT TTGTTACGCT GGCAACCTTT
ACGGCTCCGG TCACGGCCGC CGAACATGGC GTGCATTGGC TGACCTATGA ACAGGGGTTG
AAAAAACAGA AGGAGCTTCA AAAGCCCATG CTGCTGCTTT TCCATCTGCC GTATTGCTAC
CGGTGCAAGG AAATGGAGCG CAAGGTTTAC CAGGACCCAG AAGTCATAAG TTTCGTCAAT
CAACATTTTA TTCCCGTCGA AGTCGATTTG GACAAAGAGA AGCCAACAGC CAAGCTGTTC
GAGGTCGATT ACACGCCCAC CCATATCTTT ATCGCTCCCG ACGGATCTGC GGTGTTGCGG
GAAAAAGATG TGATAGCGAA ATCACAATTT GAACGCATGC TGGAATTTGT GGCGGAGCAA
AAATATAAGA CCATGAATTT CGATGCTTAC GAAAAGTGTC GGCCCTGA
|
|---|
| Protein sequence | MKGIKLILVA LTAFVTLATF TAPVTAAEHG VHWLTYEQGL KKQKELQKPM LLLFHLPYCY
RCKEMERKVY QDPEVISFVN QHFIPVEVDL DKEKPTAKLF EVDYTPTHIF IAPDGSAVLR
EKDVIAKSQF ERMLEFVAEQ KYKTMNFDAY EKCRP
|
|---|
| |