| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0401 |
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| Symbol | gph |
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| ID | 3723190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 491809 |
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| End bp | 492438 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637749986 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_355831 |
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| Protein GI | 77918016 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCG ACACCCTGTT GTTCGACCTG GACGGAACCC TTATCGACTC GGCTGCCGAC
CTGGGTACCG CCGTGAATCT GTTGCGCGCC GAGATCGATC TTGCCCCCTT GTCTATCGAC
CAGGTGCGCA CCTATGTCGG CGACGGGGCC ACCATGCTGG TGCGTCGGGC ACTACCGGAG
AAAGCCTTTT CCGAGCAAAA ACTTAGGCGT TTCCTCCAGC TGTACGAGGA ACACCTGGTG
GAAAAAACCG CCACATATCC GGGCATCGAC GATTTTCTCA TGGCGCAACA GGGTAAAAAA
ATGGCCGTCA TCACCAACAA GCCCTTTGAT ATTACTATGC GTTTGTTGTA TGAATTGGGC
CTCACGGCTT TCTTCGGATG CATTATCGGC GCCAACGGCG GGCTACCCAA AAAGCCGGAT
CCGGCGCCCG TTTTCATGGC CCTGCGCGAT CTCCAGTCCG ACGCCCATAA AGCCGTCATG
ATCGGCGACC ATCATACGGA TCTGCGCGCC GGCCATGCCG CCGGTATCAA AACCTGTTTT
TGCGCCTGGG GCATCGGCAG GACCGACGGC TTCCCCTACG ACTATCTGGC CGAAACCCCG
CAGGATCTGT CGCGCCTGTT TCCCGCCTGA
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| Protein sequence | MSFDTLLFDL DGTLIDSAAD LGTAVNLLRA EIDLAPLSID QVRTYVGDGA TMLVRRALPE
KAFSEQKLRR FLQLYEEHLV EKTATYPGID DFLMAQQGKK MAVITNKPFD ITMRLLYELG
LTAFFGCIIG ANGGLPKKPD PAPVFMALRD LQSDAHKAVM IGDHHTDLRA GHAAGIKTCF
CAWGIGRTDG FPYDYLAETP QDLSRLFPA
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