| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0394 |
|---|
| Symbol | |
|---|
| ID | 3723183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 483317 |
|---|
| End bp | 484123 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637749979 |
|---|
| Product | type II secretory pathway pseudopilin PulG |
|---|
| Protein accession | YP_355824 |
|---|
| Protein GI | 77918009 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGC TTACTGCCCG TCATGATGCC CAACATGGCT TCACCTTGAT CGAAATGATT
GTGGTGATCG TGATTATCGG TATCCTCGCG GCTTTGGGCG GCATCTTTAT CACGCGTCCT
ATCGAGGGTT TTCTCGATCT GTCGCGGCGC GCAACTCTGG TCGATGCCGC GGAAAGTGCC
CTGCGTCGCA TGCAGCGCGA TGTGCGCCAG GCTCTGCCCA ACAGCGTTCG TATCGGGTGC
GGCGGCCAGT GTCTTGAACT GCTGCATACG GTGGACGGTG GTCGTTATCG GGCCGGCGGT
CCGGGCAATG TGCTTGATTT TATCCAGCCG GACGCTGACG GTTTCGATGT GCTGGGGACC
TTGACCGCAG CGCCGGATAC CGGAGATGCT CTGGTGATTT ACAATCTGAC AGCCACGGGT
ACCACCGCCA ATGCCTATTC CGGCGATAAC CGGCGAACCG TGGCTGCGGG CAGCAGTGCA
TCATCCATCG TGCTCGCTAG CCCGCTACCT TTTCCGTTTT CTTCTCCCTA TCAGCGCTTT
TTCCTGGTCG ACGAACCGGT CAGCTACGTG TGCGACACGG CGGCCGGCAC CCTGACGCGA
TACGCCGGGT ATGCCATCGC CAGTTCCCAA TCGGCCAGCC CCGGTGGCAC TTCCGCCCTC
ATGACCCGGC ATCTGGCCGC ATGTTCCTTC GACTATTACT CCGGCACTCC GGAACGGGGA
GGGCTGGTAT CCTTGCGCCT GCAACTGGCC GAAGAGGGGG AAACCATTAC CCTGCTGCAT
CAAATCCATG TGGAGAACGC GCCATGA
|
|---|
| Protein sequence | MQQLTARHDA QHGFTLIEMI VVIVIIGILA ALGGIFITRP IEGFLDLSRR ATLVDAAESA
LRRMQRDVRQ ALPNSVRIGC GGQCLELLHT VDGGRYRAGG PGNVLDFIQP DADGFDVLGT
LTAAPDTGDA LVIYNLTATG TTANAYSGDN RRTVAAGSSA SSIVLASPLP FPFSSPYQRF
FLVDEPVSYV CDTAAGTLTR YAGYAIASSQ SASPGGTSAL MTRHLAACSF DYYSGTPERG
GLVSLRLQLA EEGETITLLH QIHVENAP
|
|---|
| |