| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0364 |
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| Symbol | tolC |
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| ID | 3723286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 452227 |
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| End bp | 453729 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637749948 |
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| Product | outer membrane channel protein |
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| Protein accession | YP_355794 |
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| Protein GI | 77917979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 75 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC CAGACTGGAA GCAGGCGGTT CCGGGGTGTG CCGAGGAACC GTCTGCTCTT
TGCCGGGGCC GTCAGCCCCG GCATTCTCGT ATCGGTTCTT TGTTTATTCC GCCAAGCAGC
CGGAAGGCGC TGAATTACAT GGATATGCAT AAGATGGAAA CTGGCGGTCT GACGGTTTTG
GGGCTGGTCT TTGCTTTGTT GGTGATCTTG TCCCTGCCGT GCGTGGCGGC AGAGCAAAGT
ACGACCCTGA CGTTGAAACA GGCGCTGGGC GTTGCCTTGA AGCATAACCA AGCGCTGCGC
CTGAGCGCTG ACGAAGTGCG ATCGGCCCGT GTCGCGCTAC GGCAGCAAAA GGACGATTTT
CTTCCGGAAG CCAGCCTGGA GGCGACCGCC GGAGGTGGCC ATGAGCAAGG GGCCGTCGGA
TCCGATCGCA ACTACCACGC ACTGTCGGCG GAGGTTGCGG TTAAAGTTAA CCTGTTTAAT
GGATTTGCCG ATCAGGCCGC CCTGGACCAG GCCGATAAGA ATCTGTCCGC CAGACAGCAG
GATTTAAACC GACAGCAACA GACCCTGGTG TTCGATACCG TCAGTGCCTA TCTGGATGCG
GTGAAGAGTC TGGAGCAGAT TCAGGTGGCA CAACAAACGC TGGAGGACAA CCGGCGGCAA
CTTGCCGATA TCGAAGCGTA CCACCGGGTC GGGCGACGGC CCATTACCGA TGTTTACAAG
CAGCGGGCCG AAACGGCCCA GGCCCGTTCC GATCTGTTGA CCGCGCAACG CGATTATGCG
GTAAGCAAGC TGGCGCTTAA GCAGGTTCTT GGAGTCGAGG CAACGACAGA CTATGAGGTC
GTACTGCCGG AAGATGTCGC CTTGCGTCTG GCGCCATCCA CCGATCTCGA GAGCCTGCTT
GGTCTGGCCA GAAAACAACG TCCGGACTTG TTGGCCAGAG AGAAAGAGCG GCTGGCCGCC
GAGGCGCAGG TCAAGGTGGC AAAAGCGGGT GCCTGGCCGA CAGTCGATTT GTCGGCCGGA
GTCGGTACAG GCTACGACAG CCGCAGCGAT AGCGCCTTCG GTAGTCAGAT GGATGAAGAT
AATTTATATG GCAAGGCCAG TGTCGATCTG AATATTCCTT TGTTTGATCG TCATCTGACC
CGTAATGAGG TAGCGCAGGC GCGCATCAAT CGCCACAGCA TCGATGTGGA GTGGGAACAG
TTGCAGTGCC AGGTCGAGGT TGAAATCGGA CAGGCGCTCC AGGAATATTT AACGGCTCTT
GATCAGCTCG AGGTTGCCAG GGCACAGCTC ACCTATGCCC AGGACGCCCT CGATTCCACC
CGCCAGCGCT ATCGTGTCGG TGCGGCGACG CTGACCGAGT TGACAGATGC CCGTTCCACA
TTTGTCGAGT CCCGGTATGC CTTGCTCGAA GCGCAAATCG ACCGGATGAT GCGTACCGTT
GCCATGGCCT ATTATCGTGG GGATTTGAGC GAGCGATCGT TTGTCGGGGA AGGTGACGTA
TGA
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| Protein sequence | MIKPDWKQAV PGCAEEPSAL CRGRQPRHSR IGSLFIPPSS RKALNYMDMH KMETGGLTVL
GLVFALLVIL SLPCVAAEQS TTLTLKQALG VALKHNQALR LSADEVRSAR VALRQQKDDF
LPEASLEATA GGGHEQGAVG SDRNYHALSA EVAVKVNLFN GFADQAALDQ ADKNLSARQQ
DLNRQQQTLV FDTVSAYLDA VKSLEQIQVA QQTLEDNRRQ LADIEAYHRV GRRPITDVYK
QRAETAQARS DLLTAQRDYA VSKLALKQVL GVEATTDYEV VLPEDVALRL APSTDLESLL
GLARKQRPDL LAREKERLAA EAQVKVAKAG AWPTVDLSAG VGTGYDSRSD SAFGSQMDED
NLYGKASVDL NIPLFDRHLT RNEVAQARIN RHSIDVEWEQ LQCQVEVEIG QALQEYLTAL
DQLEVARAQL TYAQDALDST RQRYRVGAAT LTELTDARST FVESRYALLE AQIDRMMRTV
AMAYYRGDLS ERSFVGEGDV
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