Gene Pcar_0333 details

Gene Information

• Locus tag: Pcar_0333
• ID: 3725924
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 416949
• End bp: 417440
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637749917
• Product: lactoylglutathione lyase-like protein
• Protein accession: YP_355763
• Protein GI: 77917948
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTC TGTACAACAA AGTGCTGCAA GTAGCCATGG TTGTGAAGGA TTGTGATGCT 
GCCGTAAAAC TCTGGGCCGA CAAATACGGC ATCGGTCCCT GGAATATTTA CGAATTCAAC 
CCGGATACCG TTAACGACAT GATCATCCGC GGCGAAAAGG TTGATTATGC CATGCGTCTC 
GCTTTGTGCG ATATCGGGGG CGTTCAATGG GAGCTGATCG AGCCGAAAGA CGACAAAAGC 
ATTTACGCGG AGTTTCTTAA AGATAAGGGC GAAGGCCTGC ATCATGTCGC TTTCGGAACC 
GACAATTATC AGGAAACCGT CAAGTTTTAC AAGGATAAGG GGCTTCCCGT TCTGCAGGGT 
GGCGAATGGT CGGGGCTGAC CTACACTTAT CTCGATTCGC AAAAAGATCT CAACCTTATA 
GCGGAGATTT ACGACCTCGT GCCTGATTTC GACTGGCCGG AACCGCAGGC TGTCTATCCA 
TCCGCGAAAT AG 

 

Protein sequence

MKPLYNKVLQ VAMVVKDCDA AVKLWADKYG IGPWNIYEFN PDTVNDMIIR GEKVDYAMRL 
ALCDIGGVQW ELIEPKDDKS IYAEFLKDKG EGLHHVAFGT DNYQETVKFY KDKGLPVLQG 
GEWSGLTYTY LDSQKDLNLI AEIYDLVPDF DWPEPQAVYP SAK