| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0312 |
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| Symbol | ompR |
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| ID | 3725899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 392298 |
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| End bp | 393026 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637749892 |
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| Product | putative two component response regulator |
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| Protein accession | YP_355742 |
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| Protein GI | 77917927 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000000704543 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCTTC AGCGTTTAAA GGCATGCCTT ATGGAAATTT CGGCCAACCA TGAAAAGAAC
ATCTGGATAC TTGCCCATCA GGCTCAACCG GATCTATCCT CCCTGCAGGA TCTTATGGGG
GGTGGTTATC ACCTGCAACC GTTTGCCATC CGCAAAAGCG CTGTCCTGCA TCCGCCCCAA
AAGGTGGATC TGGCCCTTTT GGATATGGCG GCATCAACCC AGGATGCCAT GACCAGCATC
ATGCGATTGC GGGAGGATTA TAAAGGGCCG TTGGCGGTGC TGGATAACCA TCCCAACGAA
AGACGTCATA TCCTTGCCCT TGAAATCGGC GCCGATGACT ATCTGCAGCA ACCCGTCAGT
TCGCCGGTGC TGGCGGCGCG TATCGAAGCT TTGTTGCGCC GCTATCAGCA GGCGGAAAGG
GAACCCTCGG CGGTGATCTC TGTCGGCGAT CTGACCATTG ACGCAACGCG CAGGGAGGTG
ACCAAAAATG AGAAGGTCAT TTCGGTCACC ACTGTCGAGT TCAAATTGCT CTGGTATCTG
GCCAGCCATG CCGGCATAGT GGTGAGCCGC AACGATATTC ATCTGGCTCT TTATAATCGG
GAATACAACG GTATCGACCG TTCCGTCGAT ATGTACATCT CTCGGTTACG AAAAAAACTT
GGCGACTGTC CCGCCCATCC CACGTTGCTC AAAACCATCC GCGGCGACGG CTACCTGTTT
GTCGGGTAA
|
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| Protein sequence | MTLQRLKACL MEISANHEKN IWILAHQAQP DLSSLQDLMG GGYHLQPFAI RKSAVLHPPQ
KVDLALLDMA ASTQDAMTSI MRLREDYKGP LAVLDNHPNE RRHILALEIG ADDYLQQPVS
SPVLAARIEA LLRRYQQAER EPSAVISVGD LTIDATRREV TKNEKVISVT TVEFKLLWYL
ASHAGIVVSR NDIHLALYNR EYNGIDRSVD MYISRLRKKL GDCPAHPTLL KTIRGDGYLF
VG
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