Gene Pcar_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0311 
Symbol 
ID3725898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp390785 
End bp392062 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID637749891 
Productcommon antigen precursor-like protein 
Protein accessionYP_355741 
Protein GI77917926 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000389869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGGA TAGCACTGGT ATTTTCGGTT GTGCTGGTAA CGCTGTGCGG AACGGGACAG 
GTTTTTGGGC AGACCGTCGA AACCCTCGAC GAGCCCGAAC AGCTGGCCAT GTCCGATACT
CTGCAATACG CTTTGGAAAA CAACCCGACC AGTCAGGTTG CCAACTGGGT GAACCCGGAT
ACCGGGCGAT CCGGTTCGGT GGTGCCGGTC AAGACTTTCA CCAATGAGCT GGGCCAGCCG
TGTCGCGAAT TTGTCACCAC GATTATTATC GGTGGTCAGG AAGAGCAGGG CTACGGTACC
GCCTGCCGTC AACCGGACGG ATCCTGGCAG ATTGTGGCCG ATGAGCAGGC ATCGACATCC
ACGCAGGCTC CCACCAACGT TTATGTTTAT CCGCCGCAGC GGTATTATTA CGTGTACCCC
GATGCGTATT ATTACTACCC GTCGCGATTC TATTATCCCT ACAATATTTT CCTGAGTTTC
GGGTTTATTT TCCGCAGCGG ATCTTTGTAT TACGGTTCGT ATTACCTGGA TAACTACCAT
TTCCATCGTC GTCATCCGGT TCATGTGCGA TCCCGGATCT ATGTCGGCCC TCGTATTTTT
ACCCGCCATC GCTGGTACAC TCACCCCTAC GTTCACCATC GTACGCGAGG GCCTTCGCCG
GCCTATCGCT ATCGCACTGA AGAACGTCGA CGGACCACCA TCACTCCGAG GTATCGCGAC
CGTCAGGACC ACCGTCAGCA ACGCATCTTG CGAGATCGAA GTCGCATCCA GCAACCGCGT
ATCCAGCAGA GACAGCCTGC CGTGAAACGC CAGCAGCAGA AGGCGCCGGT ACTGCGTCAG
CACCGCGATT CGGGCAATCA GGGCCGTATC CAGCAGAGAC AGCCTGCCGT GAAACGCGAG
CAGCAAAGGG CGCCGGTACT GCGTCAGCAC CGCGATTCGG GTAATCAGGG TCGTATCCAG
CAGAGACAGC CTGCCGTGAA ACGCGAGCAG CAAAGGGCAC CGGTACTGCG CCAGCACCGC
GATTCGGGAA AGCAGAGCCG TATTCAGTCG CAGCGGCCGC AACAGACACG ATCGGCAGTT
AAATATGAGC GGCGCAAAGC ACCGGCCACG GGCCGAGGCG ACATCCGCAA TCAGAGTCGG
TCCCGTTCAG CCCAGGTGCA GGGCAAACAA CCTGTGGTGC AACGCGAACA GCAAAGATCG
GTATCTCGGC GAGCCCCCGA AGTGCGCCAG CAGCAAAATC CCATGGCGCA CCAGGGCGGT
CGGCGGATGG CGAGATAA
 
Protein sequence
MRRIALVFSV VLVTLCGTGQ VFGQTVETLD EPEQLAMSDT LQYALENNPT SQVANWVNPD 
TGRSGSVVPV KTFTNELGQP CREFVTTIII GGQEEQGYGT ACRQPDGSWQ IVADEQASTS
TQAPTNVYVY PPQRYYYVYP DAYYYYPSRF YYPYNIFLSF GFIFRSGSLY YGSYYLDNYH
FHRRHPVHVR SRIYVGPRIF TRHRWYTHPY VHHRTRGPSP AYRYRTEERR RTTITPRYRD
RQDHRQQRIL RDRSRIQQPR IQQRQPAVKR QQQKAPVLRQ HRDSGNQGRI QQRQPAVKRE
QQRAPVLRQH RDSGNQGRIQ QRQPAVKREQ QRAPVLRQHR DSGKQSRIQS QRPQQTRSAV
KYERRKAPAT GRGDIRNQSR SRSAQVQGKQ PVVQREQQRS VSRRAPEVRQ QQNPMAHQGG
RRMAR