| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0221 |
|---|
| Symbol | |
|---|
| ID | 3722772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 285012 |
|---|
| End bp | 287327 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637749802 |
|---|
| Product | Fe-S oxidoreductase |
|---|
| Protein accession | YP_355652 |
|---|
| Protein GI | 77917837 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAG AACAACGCAT CGCGTGGGAG GCCCGATGTA TTCAGGAAGA GCCTCCGGCC
TGTTCGACAA CCTGTCCCCT GCATGTCGAC ATCCGTCAGT TCATGCGGGA GATGGCTGAT
GGCAACATGG AAGAGGCTTA CAAGGTGTTG TGTAAAAATC TGCCTTTTCC CGGGATATTC
GGACGCATCT GCAATCATCC TTGTGAGACA AAATGTCGTC GCGGGGAAGT TGGCGAGGCG
CTTGGCATCG GGTCTCTGGA GCGGTTTTGC GTGGAATTTC ATGGCGTGCC GGATCGGGTT
AAACTGCTGC CCCGCAAAAG CAAGACGGTG GCGGTTGTCG GCGGCGATGT TGCCGGCCTG
GTCGCTGCCC ATGACCTGCG CAAAAAAGGC TACGGAGTCA CCTTGTTGGA AACGGCTTCG
CAATTGGGCG CGACGTTTCG CAAATTTTCC GAAGATCTGC TACCGGATGC GACGCTTGAA
GACGAGCTGG CCGTTCTGAA AAATATGCGG GTGGAGATAC TGCTTGGTGC CGTTCTGGAC
GACGCTGCGT TCGAAAACCT TTGCGGCGAA TTTGACGCTG TATTCATCGA TCGCACCTGC
CCAACTTGTG CATCCCTGCC CCTTGATAAC GATGCTTCCG GTCTGATTGC CGTCGATCCT
GTTACCGGTG GAACTTCGCG ACCGGAAGTG TTTGCCGGTG GGCAAGGCGG CGATGTGCCG
ATCATGCTGG CTGCCGCAGG TCGCAAGGGG GCGTTGTCTA TCGAGCGTTT TCTGCAGCAG
GCCCATATGA CCATCGGCCG GGAAAACGAT GGGCCTTACG AAAGCCGGCT TTACACCAAC
CTCGAAGGAA TCGCACCTCT TGACCGGGTT CGTCCCGCGG ATGTCGATGC CGGCTATACA
GCGGATGAGG CGATGCGGGA AGCGGCTCGT TGCATCCAGT GCGAATGTCT TGAGTGCGTC
AAGGTCTGTC AGTATCTGGC GCATTACAAA AAGTATCCGA AGAAATATAT TCGTCAGTTT
TTCAACAACG AAAAGGTATT GCTTGGCGCC TCCCACAGCT CCAACCAGAC GATCAACTCT
TGTACCCATT GCGGGTTGTG CGCAGCTGTT TGCCCCAATG ATCTTCACAT GGGGGAAGTC
TGTCTTGAGG GGCGCTACGC CATGTTGCAG GGCGACTATA TGCCCCCCTC GGCCCACGAA
TTCGCTTTGC AGGATATGGC GTTCAGTACC AGCGACGAGT TTGTTCTGTC CCGTCATCAA
CCGGGTACCC GGCAGAGTGC CTATCTTTAT TTTCCCAGTT GCCAGTTAAG TGCCACAGCC
CCTGGAGAGG TTTTGCAATC GTACCGTGTG CTATGCGAAA AGCTGTCCGG CGGGGTCGGC
ATTCTACTTG GGTGCTGCGG AGCACCCGCC TTCTGGTCCG GTCGTGATCC CCTTTTTCGC
GAGACCCTGG ATACCATCCG CAAGCAATGG CAGGCCATGG GACAGCCCAA AGTGATCACC
GCCTGCTGCA CCTGTCAGAG CGTGTTCAAG GAGCATCTTC CCGAAATATC CTCAACGTTG
CTTTGGCAGG TTCTGGAAAA CAACGCGCTC ATCGATAAGG CGCTCCGGGA AGAGGTTGCC
GGTCATGCGG TCGCGGTGCT CGATCCCTGC AGCACCCGCC ACGATCCGCA AGCTCAAAGC
GGTGTGCGAC GCATTCTCGG CGATCTTGGG TTTACCGTTG AGGAATTGCC CCTTTCCGGA
GCAATGGCCG AATGTTGCGG ATACGGCGGA TTGGTTTTCA ACGCCAATCC CCAACTGGAT
AACGCCATCG TCACTCGCCG TGCGGAGTAC AGTGAGCGGG ACTATCTGGC TTACTGCGCC
ATGTGTCGCG ATAAATTCGT TAACGTGGGT AAGCGTACGG CGCATCTTAT CGAGTTGCTG
TTCCCTTCTG TGGATGGCAA CGACCCCTGG GCGCGCGGCT GGATTTCCTG GTACGAGCGT
CGCAAGAACC GTCAGCGGGT AAAGGACGAA CTGCTGGCCG ATCTTGGTGA AACCGTGGAG
CGTGCCATGG AACCTTATGA CAAAATCGTT TTGCACATCG ACCCCGAACT GCTTCGCACT
ATTGACAGCC GCCGCATCCT GGAGAGCGAT CTGCGCCAGG TCGTTCACCA TGCCGAAAAG
ACGGGCAAGC GCCTGCGTCA TAACCAGAAT GGCCAGTTTC GCGCCAACCT CAAATTGGGC
AATACCACCT TTTGGGTTGA TTACGCCCCC GATGGAGAAG GTTACCGGGT TCACAATGCT
TATTGTCACC GTATGAACGT TACGGGGGTG AAGTAA
|
|---|
| Protein sequence | MEKEQRIAWE ARCIQEEPPA CSTTCPLHVD IRQFMREMAD GNMEEAYKVL CKNLPFPGIF
GRICNHPCET KCRRGEVGEA LGIGSLERFC VEFHGVPDRV KLLPRKSKTV AVVGGDVAGL
VAAHDLRKKG YGVTLLETAS QLGATFRKFS EDLLPDATLE DELAVLKNMR VEILLGAVLD
DAAFENLCGE FDAVFIDRTC PTCASLPLDN DASGLIAVDP VTGGTSRPEV FAGGQGGDVP
IMLAAAGRKG ALSIERFLQQ AHMTIGREND GPYESRLYTN LEGIAPLDRV RPADVDAGYT
ADEAMREAAR CIQCECLECV KVCQYLAHYK KYPKKYIRQF FNNEKVLLGA SHSSNQTINS
CTHCGLCAAV CPNDLHMGEV CLEGRYAMLQ GDYMPPSAHE FALQDMAFST SDEFVLSRHQ
PGTRQSAYLY FPSCQLSATA PGEVLQSYRV LCEKLSGGVG ILLGCCGAPA FWSGRDPLFR
ETLDTIRKQW QAMGQPKVIT ACCTCQSVFK EHLPEISSTL LWQVLENNAL IDKALREEVA
GHAVAVLDPC STRHDPQAQS GVRRILGDLG FTVEELPLSG AMAECCGYGG LVFNANPQLD
NAIVTRRAEY SERDYLAYCA MCRDKFVNVG KRTAHLIELL FPSVDGNDPW ARGWISWYER
RKNRQRVKDE LLADLGETVE RAMEPYDKIV LHIDPELLRT IDSRRILESD LRQVVHHAEK
TGKRLRHNQN GQFRANLKLG NTTFWVDYAP DGEGYRVHNA YCHRMNVTGV K
|
|---|
| |