Gene Pcar_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0179 
Symbol 
ID3722992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp225940 
End bp227097 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content59% 
IMG OID637749756 
Producthypothetical protein 
Protein accessionYP_355610 
Protein GI77917795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000153754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCTGT TATCCAATAC TGTCAGTATC TGTCAGTTCA GCGTCGTCGG TGAACTGCCG 
ACGGAGAATC TTATCGAATG GGCAGGTCAG TGTCTGGCCG GGCATGCTTT TCAGAGTATT
GAAGGCAGCA GCGAGGAACA GTCGACCGGC TGGGTGCATC TGGACGATTT CGAGGCGTGG
GATTTCGAGG AGCCCGATGC CTACGCCCGC GACCATTACC TCACCTTCAG TCTGCGGCGC
GACCGGCGCC GTATTCCCGG CGGCCTGCTC AAGGCCCATC TCGAACGTGC CGAGCAGAAG
TTTCTGGCCG AACATCCCGG ATTGCAGCGG GTTCCCAAAA ACAAGCGCGA GGAATTGCGC
GAGGCGGTGC GCGGCACCCT GTTGTCCCGA ACCTTGCCGT CTCCGGCGAC GTTCGATGCC
GTCTGGGATA CCCAAAGCGG ACGCCTTACG GTGACCACCC TTAACGGCCA GACCCTCGAG
CTTTTCGAAA ATCTTTTCAA AACTTCCTTC GAGGGGTTGC GTCTGGTGGC GGTGCATCCC
ATGGCCCGGG CCGCAGCGGT GCTCGACGAC AACCACAAGG AGGGGCTGCA GCAGCTCAAT
CGTGCGGTTA ACGATACCGT GCTCGATCAG ATCAAGGACA ATCTCTGGCT GGGCTGGGAC
TTTTTGCGCT GGTTGGTCGA CCGCACCCTG AATTCCGGAT CCGACTATCG CGTCACCCAA
CCAGGTCCGG CCCTTGACGG AGAAAGTTTC GTTGCCTATC TCAACGATCG TCTGGTGCTG
ACCGGCGGCC ACGAAGAGGG GACCCAGAAG ATCACCGTGG CCGGTCCTCA GGACCGCTTT
GATGAAGCGC TGGCCGCTCT CGATACCGGC AAGGATATCG GCGAGGGCAC CCTGTATCTG
GAGAAGGGCG AACTGCAGTG GAAAATGACC CTTAAGGGCG AACTGTTTCA GTTCGGATCC
TACCGCTGCC CGGCTGTCAA ACTGGAAAAA GACGCTTTGA CCGATCAGCA CAGCGAGCGC
ATGGCGGTCT TTTTTGAGCG CATGTACCTG CTCGAAGAAG GGCTGCAGCT GTTCGACAGC
CTTCTGAACG CCTTTTTGAA GGAACGCCTG TCGGAAACCT GGCGTCCTCC CCTGACGGAA
CCGTCGACGG CCGAATAA
 
Protein sequence
MGLLSNTVSI CQFSVVGELP TENLIEWAGQ CLAGHAFQSI EGSSEEQSTG WVHLDDFEAW 
DFEEPDAYAR DHYLTFSLRR DRRRIPGGLL KAHLERAEQK FLAEHPGLQR VPKNKREELR
EAVRGTLLSR TLPSPATFDA VWDTQSGRLT VTTLNGQTLE LFENLFKTSF EGLRLVAVHP
MARAAAVLDD NHKEGLQQLN RAVNDTVLDQ IKDNLWLGWD FLRWLVDRTL NSGSDYRVTQ
PGPALDGESF VAYLNDRLVL TGGHEEGTQK ITVAGPQDRF DEALAALDTG KDIGEGTLYL
EKGELQWKMT LKGELFQFGS YRCPAVKLEK DALTDQHSER MAVFFERMYL LEEGLQLFDS
LLNAFLKERL SETWRPPLTE PSTAE