| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0140 |
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| Symbol | |
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| ID | 3722953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 172516 |
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| End bp | 175449 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637749717 |
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| Product | ATP-dependent transcriptional regulator |
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| Protein accession | YP_355571 |
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| Protein GI | 77917756 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAAA CTGCGGAATT CAGGTCGCAA GTCAAGCTTG ACAAGTTTTA CCCGCCCCAG
GTCGATACGC CCCGGTTTCT GTGTCGTGAT CGACTTGTTG ATCGGTTGTT GCGCGAGGGC
GGTGCCCGAA TACCGGATAT TCTTCTCGAA GCGCAGGCGG GGCAGGGGAA AACCACGGTT
ATCAAACAAT TCCTCGATCG CTCCAAAACG GCCTTTGTCT GGTATCAGGT CGGTGCCGAA
GACGCTGATC CGGGATTTTT CCTCACCGCT ATCGCGACCT GCATCTATGC GCGTTTTCCC
GAATGCCCCT CCGCCAAAAC GGCACAGATT CTGTCCTGCA GCGACTTCGC CCTTTTCGAT
CTGCAAAAAC GCGTCGATCT GCTGCTAAAC GATCTGTGCG CGTGCCTGAC CGATGATCTG
TACATGGTTT TTGATGACCT GCATTACCTG CTAGATCATG AGTTCAGCCT GGCTTTGCTG
AGCCACCTGT TTGAAACAGC TTCCCCCCGA TTGCATTTCA TCCTTTCCTC ACGCGAATGT
TTGCCGCTGA ACGATGCGCT ACTCAGCGAC GGTAACCGGC AATGGCTACG GCTCGGAAAT
CGGGACCTGG CATTTGATGA GACGGAAATC ACAGATTTTT TTTACCGGAT TCATCACCTT
GATGTTCCCT CCGATACGAT CAGAACGGTC GCGCGCACCA CGGACGGTTG GGTTATGGGG
ATATCCCTGC TCGGGCTGCA GTTGGCCCAG CAGGAAGGGG CGGCTGGCTT TCCAGCTCTG
GTCAATTGCC GTGGCGAAGG AACCCGGGCG ATCCTTGACT ATTTCCGCCG GGAGATTTTT
GCTCCTTTGC CGCAGCGCTT GCACCGACCG CTGCTGGTTC TTTCCCTGCT GGAAGAGATC
CCCGTTGCGT TGGCGGTGGA ACTCACCGGG GAGGTTGAGA TCGGCGTCGA TTTTTGCGAG
CTTGCCCGGA GCAATGTTTT TCTCCGTCCG CTCGATCCGG ATCGCACGGA GTTCGGTCTG
CACCACCTGT TTCAGCAATT TTTGCGGGAG AGGGCGACAG TGGCATTAAG TCCCCAGGCC
ATTCGCAGGA TATACCAACG CGCCGGGCAG TTCTGTCTTA AGCGTGAGGA TATCGCGCAA
GCCCTGCGTT ACCTGCTGCA AGCCGGGGAT TATGCAGCCG TTGAATCTGC TCTTCAGGAT
TACGGTATGG ACTTTTTGGC GACCAATCAG ACTGCCACTC TGGCCGCGAT TCTGCAGCAG
ATTCCGCAGG CTGACCTCTC GGGCCAGGGT TGGTCCTGCT TCTATCTGGC GCTGGCTTAT
ATGGATTCCG CGCCGTCGCT GGCCCTGCCG CTGCTCAAAC AAGCTCTGGT GATTTTTATC
GCCCGTCAAA ATGATCTCGG CGAATTGCTG GGCCTGGCCC ATATGATCTC CATTCACATT
ACCACTACCG GGCATTACCG GGAGGGTGAG GAAATGTTGT TCCGGGCCGA ACAGTTGTTT
GCCCGGGTGG GCGGGGGACT CGACGTTGCC ATGACCATCC TTGTCGCCCG CAGCCTGGCC
ATGGGCTACT GCATATTCCT GGCGGATGTC GATGAGGCGA CCCGCTTCGC CTCCCTTGCC
CTGAGCCTGG CCCGGCAGGA ACAGCTGGCC AATTTCGAAG CGGCCATGCT GATGGTCATG
GGGTATATAC ACATTTTCGC GGGGCATACT GTCCTCGCCC GCATGTACAT GGAGCAGGCC
GCTCCCTGTG TGCAGCGTGC CGAAGTCGGA GCGTTTAACA GCCTGTCCAT TCGCATGATG
CTGTTCAACT TCCTGTATAT CGAAGGCGAT TTCGCCAACT ATTTCGAACA AAAAAACCAG
CTGGTCGAGG TTCTCGGCAA CGCCATGTTC TCTCAGTCGA TCGCCGCTCC TTTCTGTACC
ATCTGGGAGA TGGATATCGC CATCAACCAG GGACGCTTTA CCGACGCCCT GGCCCTGGCC
AATCAGGCTT TGGGGCAACA GCCGCCGCTG AGTCCGCATT TGCGCAGTCA GGTCTTGCAG
CTCCAATCCG TGGTGCTTGG TCTGCTCGAT CAACCCGATC GTGCCTGGCG GGCCGCCGAG
CAGTCGCAGC AATTGCGGGA ACTGTCGGGC GGGCGCTATT TTGTCACATT GAATCAATTG
ATGGTCGGTC TGAGCTGTTT CCATTGCGGC CGCCCCGTCC CGGCGCTGCA ACGTCTTAGT
GACGGGATTG AGGCCGCGCG GCAGATGCCG ACCGAATATC TGCAGGCCTG CGGTCTTTTG
CACCGTGCGG CGGTCTACCT GGCGCTCGGC GAGCAAACGC TGGCCGGGCA GGATATCGCC
CAGGGGCTGG GATTGATGCG CCGCAATGCT TACCGGCATT TCTGGGGATG GGCCCCGGCG
GCTATGCAGA AAATCCTGAG CTTCGCCGTC GCGCATCGGA TCGAAACCGA TTATGCAAGG
GAGTTGGCCG CCGAGCGTCT CGGCATAGCC CTGTCGGAGG ATGGTAGCGC CATCGCGCTG
CTCGATATCC GCACCCTCGG CGGGCTCCAT ATCCTGCTTG AGGGCAAGCC TTTGCTTGCG
GCCGAGGCTT TAACCCCGCT GCAGCGTGAA TTGTTGTGTC TGCTGGTTTC CGCGCCGAAG
TGTAAAATGC CGCAGGGGAT CCTGCAGCTT CATTTCTGGC CCGACAGTTC CGTCGATGCC
GCCCGCATGA AGTTTGACAC CCTGGTTTCG CGGTTGCGCA AAACCATGAC GCAGGTGTTG
CCGGATAACA CCGCCCATCG TTATCTGAAA AGGGAAAAAG GCATGCTGTG GCTGGCCCAT
TGCCGGGTTG ATGCCCACGA TTTTTTAACC GCGGTCAATC GTGGGTTGCG GCATGCTTGC
CGACAGGAGT CGTGGCAAGC TGGCAATGCT TTTACCACCG CCCGGTCGCT GTAG
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| Protein sequence | MRQTAEFRSQ VKLDKFYPPQ VDTPRFLCRD RLVDRLLREG GARIPDILLE AQAGQGKTTV
IKQFLDRSKT AFVWYQVGAE DADPGFFLTA IATCIYARFP ECPSAKTAQI LSCSDFALFD
LQKRVDLLLN DLCACLTDDL YMVFDDLHYL LDHEFSLALL SHLFETASPR LHFILSSREC
LPLNDALLSD GNRQWLRLGN RDLAFDETEI TDFFYRIHHL DVPSDTIRTV ARTTDGWVMG
ISLLGLQLAQ QEGAAGFPAL VNCRGEGTRA ILDYFRREIF APLPQRLHRP LLVLSLLEEI
PVALAVELTG EVEIGVDFCE LARSNVFLRP LDPDRTEFGL HHLFQQFLRE RATVALSPQA
IRRIYQRAGQ FCLKREDIAQ ALRYLLQAGD YAAVESALQD YGMDFLATNQ TATLAAILQQ
IPQADLSGQG WSCFYLALAY MDSAPSLALP LLKQALVIFI ARQNDLGELL GLAHMISIHI
TTTGHYREGE EMLFRAEQLF ARVGGGLDVA MTILVARSLA MGYCIFLADV DEATRFASLA
LSLARQEQLA NFEAAMLMVM GYIHIFAGHT VLARMYMEQA APCVQRAEVG AFNSLSIRMM
LFNFLYIEGD FANYFEQKNQ LVEVLGNAMF SQSIAAPFCT IWEMDIAINQ GRFTDALALA
NQALGQQPPL SPHLRSQVLQ LQSVVLGLLD QPDRAWRAAE QSQQLRELSG GRYFVTLNQL
MVGLSCFHCG RPVPALQRLS DGIEAARQMP TEYLQACGLL HRAAVYLALG EQTLAGQDIA
QGLGLMRRNA YRHFWGWAPA AMQKILSFAV AHRIETDYAR ELAAERLGIA LSEDGSAIAL
LDIRTLGGLH ILLEGKPLLA AEALTPLQRE LLCLLVSAPK CKMPQGILQL HFWPDSSVDA
ARMKFDTLVS RLRKTMTQVL PDNTAHRYLK REKGMLWLAH CRVDAHDFLT AVNRGLRHAC
RQESWQAGNA FTTARSL
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