Gene Pcar_0137 details

Gene Information

• Locus tag: Pcar_0137
• ID: 3722932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 171072
• End bp: 171557
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637749715
• Product: type II secretory pathway, pseudopilin PulG
• Protein accession: YP_355569
• Protein GI: 77917754
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 82
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTATGG AAAATTGTCG TAATCAAAAA GGCATGACTT TAATGGAATT GGTCGTCGCC 
ACGGCTATTT TGGCTATTCT TGCTTCGGCG GTCCTGCCCT TGAGTCAGGG CGCTGTGAGA 
CGCTCTCGGG AGCTTGAACT GCGCCGCAAT CTGCGAATCC TTCGCTCGGC TATCGATGAC 
TATAAAATGG ATTTTGATCG AGCGGTAGAA GAGAAGAAAA TCATACCATC CCTTACCGAA 
ACCGGTTATC CAAAAAGTCT GGAGGTGCTT GTGGAGGGAA AGGATTGGAA AGGTCTCTAT 
CCCTATAAGC GTAAATATCT GCGGCGGATT CCCAAAGATC CTTTTGACGA ATACGGGGAG 
GGCTGGGGTT TGCGTTCTTA TCGCGAAGAC CCTGAATCGA CCATTTATGG CGGCGAGGAT 
GTTTATGACC TTTATTCACA GAGCATTAAA ACGGCCTTGG ACGGAACTCT TTACAAAGAT 
TGGTAG 

 

Protein sequence

MSMENCRNQK GMTLMELVVA TAILAILASA VLPLSQGAVR RSRELELRRN LRILRSAIDD 
YKMDFDRAVE EKKIIPSLTE TGYPKSLEVL VEGKDWKGLY PYKRKYLRRI PKDPFDEYGE 
GWGLRSYRED PESTIYGGED VYDLYSQSIK TALDGTLYKD W