Gene Pcar_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0104 
Symbol 
ID3722899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp125632 
End bp126117 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID637749683 
Productputative transcriptional regulator 
Protein accessionYP_355537 
Protein GI77917722 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCAAAA TTGGAGACAT GGCTGTTTAT CCAGCTCAAG GTGTCGGGGT TATTGAGGCC 
ATCGAATCGA AAGAATTCGT TGGCCAAAAA ATGGATTTCT ACGTTCTTCG CATTGTCGAC
AGCGACATGA CCATCATGAT TCCGGTCAAC AACGTCGACA GCGTCGGCAT GAGATCCCTC
ATCGACAAAG ACCGCGTCCG CACAGTTTAC GACATCCTCA AGGACAAAAC TCAAAATCAG
GGCAATCTGG CTTCATGGAG CCGCCGCCAA CGCGATTACA ACGAAAAAAT CCGCTCCGGC
GATGTTTTCG AGGTAGCGGA GGTTTTGCGG GAACTCTACA TGATTCGCGA GGATAAAGAG
CTCTCCTACG GTGAAAAAAA GGTTCTGGAA CTTGCCCGTA AACTGGTTGT CAAAGAAATT
GCCCTGGCGG ATGGCAAAGA CGAACAACAG GTCACAGACC GCGTTGAAAG TTTTTTTGGC
CACTGA
 
Protein sequence
MFKIGDMAVY PAQGVGVIEA IESKEFVGQK MDFYVLRIVD SDMTIMIPVN NVDSVGMRSL 
IDKDRVRTVY DILKDKTQNQ GNLASWSRRQ RDYNEKIRSG DVFEVAEVLR ELYMIREDKE
LSYGEKKVLE LARKLVVKEI ALADGKDEQQ VTDRVESFFG H