Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0104 |
Symbol | |
ID | 3722899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 125632 |
End bp | 126117 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637749683 |
Product | putative transcriptional regulator |
Protein accession | YP_355537 |
Protein GI | 77917722 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCAAAA TTGGAGACAT GGCTGTTTAT CCAGCTCAAG GTGTCGGGGT TATTGAGGCC ATCGAATCGA AAGAATTCGT TGGCCAAAAA ATGGATTTCT ACGTTCTTCG CATTGTCGAC AGCGACATGA CCATCATGAT TCCGGTCAAC AACGTCGACA GCGTCGGCAT GAGATCCCTC ATCGACAAAG ACCGCGTCCG CACAGTTTAC GACATCCTCA AGGACAAAAC TCAAAATCAG GGCAATCTGG CTTCATGGAG CCGCCGCCAA CGCGATTACA ACGAAAAAAT CCGCTCCGGC GATGTTTTCG AGGTAGCGGA GGTTTTGCGG GAACTCTACA TGATTCGCGA GGATAAAGAG CTCTCCTACG GTGAAAAAAA GGTTCTGGAA CTTGCCCGTA AACTGGTTGT CAAAGAAATT GCCCTGGCGG ATGGCAAAGA CGAACAACAG GTCACAGACC GCGTTGAAAG TTTTTTTGGC CACTGA
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Protein sequence | MFKIGDMAVY PAQGVGVIEA IESKEFVGQK MDFYVLRIVD SDMTIMIPVN NVDSVGMRSL IDKDRVRTVY DILKDKTQNQ GNLASWSRRQ RDYNEKIRSG DVFEVAEVLR ELYMIREDKE LSYGEKKVLE LARKLVVKEI ALADGKDEQQ VTDRVESFFG H
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