| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3813 |
|---|
| Symbol | parB |
|---|
| ID | 3721394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 11308 |
|---|
| End bp | 12216 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640072652 |
|---|
| Product | ParB-like nuclease |
|---|
| Protein accession | YP_354499 |
|---|
| Protein GI | 77464996 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.112048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACG ACATGGGGCC GACCGGCCAG AAGCAGGTGA CTCTGATCCC GACCGAACGG
ATCCGGGTTC TCAATCCCCG CGTCCGCAAC CGTCGCACCT TCGAGGCGAT GGTGGAGAAC
ATTGCACGCA TCGGCCTGAA GCGCCCGATC ACCGTGGCGC CGCGCGCCGG GACCGATCCG
CAGGAATACG ACCTGGTCTG CGGTCAGGGC CGCCTCGAGG CCTTCATCGA ACTGAAGCAG
GACCACATCC CCGCCATCGT GATCGAGGCC GACGAAAGCG ATTGCCTCGT CATGAGCCTC
GTCGAAAACT GTGCGCGGCG GCAGCACAAC CCCATCGATC TGATGCGCGA GATCGGCGCG
CTCCGCCAGC GTGGCTACAA CGACCGTCAG ATTGGCGAAA AGATCGGCGT GTCCACCGAA
TATGTGAACA TGATCGCGGG GCTGCTGGAG AAAGGCGAGG AGCGCCTGGT TTCGGCCGTG
GAAACCGGGG TGCTTCCGCT GAATCTGGCC ATCGAGATAT CCAAGACCGA CGCGAAGGGG
GCGCAGAAAG CGCTCATGGA CGCCTACACC CAGAACAAGC TGCGGGGACG GAAGCTGGCA
CTGGTGCGCC GCCTGATCCA GCAGCGCGAA CTGCGCGGTC CGCAACTCCA CAGCAATCCG
CTCGGACGCA AGCCTCCGAA ACGGGCGCTG ACGAGCGAGG GCCTTGTCCG GGCGTATCAG
CAGGAGGCCA CGCGCCAGAA GCTCCTGATC AAGAAGGCCG AGCTCACTCA GAGCCGGCTG
ATGTTCGTGC GCGAGGCCTT CCGCAAGCTC CGCGCGGACG GTCACTTCAT GACCCTGCTC
AGGGCGGAGG GGCTTGAGAC GATGCCCGCC GATCTCGCGC GTTCCCGGAC CGAGGGGGCA
CCTACATGA
|
|---|
| Protein sequence | MPDDMGPTGQ KQVTLIPTER IRVLNPRVRN RRTFEAMVEN IARIGLKRPI TVAPRAGTDP
QEYDLVCGQG RLEAFIELKQ DHIPAIVIEA DESDCLVMSL VENCARRQHN PIDLMREIGA
LRQRGYNDRQ IGEKIGVSTE YVNMIAGLLE KGEERLVSAV ETGVLPLNLA IEISKTDAKG
AQKALMDAYT QNKLRGRKLA LVRRLIQQRE LRGPQLHSNP LGRKPPKRAL TSEGLVRAYQ
QEATRQKLLI KKAELTQSRL MFVREAFRKL RADGHFMTLL RAEGLETMPA DLARSRTEGA
PT
|
|---|
| |