| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3523 |
|---|
| Symbol | |
|---|
| ID | 3721938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 602038 |
|---|
| End bp | 603003 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640073188 |
|---|
| Product | ABC peptide transporter, inner membrane subunit |
|---|
| Protein accession | YP_355026 |
|---|
| Protein GI | 77465523 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0138063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA CTTCCCATCC GATCTTGTCC ATGGTGGCCA GTCGGGTCGG TCTGGGGCTT
CTCAGCCTCC TTATCGTGTC TCTGGTGATC TTCTTCTCGG TGAGCCTGCT GCCGGGCAGC
TATGCCTCGG CCATCCTCGG GCAGAATGCG ACGCCCGAGG CGGTGGCGGC TCTCGAGACC
CGGCTCGGGC TCGATCAACC GGCGATCTGG CGCTACCTTT CGTGGCTCGG CGCGGCGGCG
ACGGGCGATC TCGGCCAGTC CTTCGCCGGT CGGCCGGTCA TGGCGGTGCT GGGGCCGCGG
CTCCTCAACA CGATCACGCT GGCCTCGATC ACGGCCGTGA TCGCGGTGCC GCTCGCGATC
ACCCTCGGTG TGATCTGCGC GCGCTTCCGC GGCCGGTTCA TCGACCGCTT CCTGTCGACC
TCGACGCTCG CCTCGATCTC GCTGCCGGAA TTCTTCGTGG CCTATCTGAT GATGATGATC
TTCGCGGTGA AGCTGCAATG GTTCCCCTCG ATGGCGGGGA TCCGCAACAG CATGGATCTG
GGCGAGCAGC TCTACCGCAT GGTGCTGCCG ATCCTGACGC TGCTCCTCGT CATTCTCGCG
CACATGATCC GCAACACGCG CGCGGCGATC CTGTCGGTGA TGTCGAGCCC CTATGTCGAG
ATGGCGCGGC TGAAGGGCGA ATCCGAGGGC CGCGTGGTCA CGCGTCAGGC GCTGCCCAAT
GCCATCGGCC CCATCGCGAG CGTGGTGGCG CTGAACCTCG CCTATCTCAT CTCCGGCGTC
GTCGTGATCG AGGTGGTCTT CGTTTATCCG GGCGTCGGTC AGGCGATGAT CGACGCGGTG
CGCAACCGCG ACGTGCCGGT GATCCAGGCC TGCGCGCTGA TCTTCGCCAC GGCCTACATC
GGCTTCAACC TGCTGGCCGA TATCGTCTCG ATCGTCAGCA ACCCGCGCCT GCTGCATCCG
CGCTGA
|
|---|
| Protein sequence | MNRTSHPILS MVASRVGLGL LSLLIVSLVI FFSVSLLPGS YASAILGQNA TPEAVAALET
RLGLDQPAIW RYLSWLGAAA TGDLGQSFAG RPVMAVLGPR LLNTITLASI TAVIAVPLAI
TLGVICARFR GRFIDRFLST STLASISLPE FFVAYLMMMI FAVKLQWFPS MAGIRNSMDL
GEQLYRMVLP ILTLLLVILA HMIRNTRAAI LSVMSSPYVE MARLKGESEG RVVTRQALPN
AIGPIASVVA LNLAYLISGV VVIEVVFVYP GVGQAMIDAV RNRDVPVIQA CALIFATAYI
GFNLLADIVS IVSNPRLLHP R
|
|---|
| |