| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3428 |
|---|
| Symbol | |
|---|
| ID | 3721714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 497401 |
|---|
| End bp | 499359 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640073095 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_354933 |
|---|
| Protein GI | 77465430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCG TCCCAGCGTC CCCCGGCGCC GCTCCGATCC GGCGCGACCC CTCCGACCTG
CGCGATCAGG TCTATCTGCC CTCGCTGAGG CCGCTCGCGC CCCGGACGGA GCTGCCGTCC
TGCCTTTCAG GCGGCACCCT CCTGCCCCGC GATCAGCAGG AGGCCGAGAG CTGCGCCGGT
CAGGCCCTCG CGGCGCTGAT CGATCTGCAG CACCAGAGCG CGGGCGCGGC CACGGCGCGC
GTGTCCGCGC GGATGCTCTA CCGGATGGCG CTGGTGCAGG ACGGAAGCGC GGGCGGCGGG
GTGGCCTCGC TCCGCTCCGT GCTGAAGGGC TTCTACCATT ACGGCGTCTG CCCCGAGAGC
CTCTGGCCCG ACGGGAGCGG TTCGGATGCG CTGACCGCCG AACGGGCGAA GGCCGCGCGC
GGCGTGACGC TCGGCGCCTA CTATCGCGTG CTGCCCGGCC TGAACGACTG GCATGCGGCG
CTGACCGATG TCGGCGCGCT CCTGGTTTCG GCCGAGATCC ACGAGGGCTG GGACTGCCCC
TTCGATCCGC AAAAGCCCCG CGACCGGCAG GGCCTCATAG TGCCCGTGCG CAGCGGCGGC
ACCGGCCACG CCTTCCTTGT GGTGGGCTAT ACCGAGGCGG GCTTTCTGGT CCTGAACTCC
TGGGGAGCTG CCTGGGGCGG TTACGACGGG CGGCCCGGGA TCGCGCTCTG GCCCTACGAG
GACTGGGCCG AGACGGTCAT GGACGCCTGG GTGCTGAGGC TGGGGGTGCC CGCGCCTGCC
GCCTTCGCGC AGGCGCGCGG GCTCCATGGC CTCGGCTTCG ACACAGGCCC CCTCGGCGCG
TCGCAGGCCG CCTGCCACCG GCTGCTGGGC CATTTCGCCC ATCTCGACGA CGGCCGGCAT
GTCGACAGCG GCAGCTACGC CTCGTCCCGC GCCTCGGTGG AGGAGACGGC CCGCTGCCTC
GAGGCGCGGC CGCGCCCCGT GCTCCTGTCG GTGGCAGGCT CGCTCTTCGG CCTTCAGGCC
GGCATCGCGC ACGAGATCCG GCGCCGCCCG ACCGTCGAGG CCGTCGGTCT CTATCCCTAC
ACAGTCTTCT GGTGCAACGA CGCCTTCGAC AGCACGAGCC TCGTGCTCGA TCACCTCTTC
GAGAAGGCGG TCCAGAAGGT CGGCCCCTTC GACCCGACCC TCGATGACAC GATCGAGCGC
GATACCGCCC CGATCGGCCG CGCCTTCTGG CGGGACGTCA AGGCCGCGGC ATGGCGCGCG
GGCAGCCACC GCCGCGACGG CCGCGAGGGC GATGCCGCCC ATCTCTTCGA CCGGCTGGCC
GCGACGGGCG CGCCGCTGCA TCTCCTGACC GACGGCGCCG GGGCGATCCT CCTCGGCCGG
TATCTGCGCT CGCTGGAAGA GGGCGCTCTT CCGCCCGATG AGGCCGCCCG CAGGCAGAGG
CTGCGCGAGA GGTTCTTCGC CGCCACGGCC TCGCTCACCC TCGTCACGCC GCCCCTCACG
CTCGCGGCCT TCGACGAGGC CTTCGGGCCG CTTATCGACC ATCTGCCCGA GGGCCGCGCG
ACGCTCTGGG TGCCGTCGCG GGGCCTCGAT GCGAAGCTGC ATGTCGGCGC GTACGCGCGC
TCGATCCTGC ATCTGATCTG CCACGGGTTC GAACGCGGCG AGGAGGATGG CACGGACGCG
CCCACGCGGA GCTTCGTGGG CATGCCGCAG CATGTGACGG GGCTGCCCGG CCGGCTGACG
CCGCGGCTTG CCAAGCTGGC CGTCTGCCGG ATCGCGCAGC CCGACGCGTC CCGGCCCCGC
TTCACGCAGG CCGACGTCAG CCTGAGTGCC GACTGCCACC GGCGGACACT CGACAGGATC
CGGGCCATTG AGGCCCAGCG ACAGGGAGGA ACGGATGACG GAGAAAATCA CGCTCGAGCA
GCTGCAGGAG ATGGCGGCCG ATCCCGGAAC GCGTCCTGA
|
|---|
| Protein sequence | MAPVPASPGA APIRRDPSDL RDQVYLPSLR PLAPRTELPS CLSGGTLLPR DQQEAESCAG
QALAALIDLQ HQSAGAATAR VSARMLYRMA LVQDGSAGGG VASLRSVLKG FYHYGVCPES
LWPDGSGSDA LTAERAKAAR GVTLGAYYRV LPGLNDWHAA LTDVGALLVS AEIHEGWDCP
FDPQKPRDRQ GLIVPVRSGG TGHAFLVVGY TEAGFLVLNS WGAAWGGYDG RPGIALWPYE
DWAETVMDAW VLRLGVPAPA AFAQARGLHG LGFDTGPLGA SQAACHRLLG HFAHLDDGRH
VDSGSYASSR ASVEETARCL EARPRPVLLS VAGSLFGLQA GIAHEIRRRP TVEAVGLYPY
TVFWCNDAFD STSLVLDHLF EKAVQKVGPF DPTLDDTIER DTAPIGRAFW RDVKAAAWRA
GSHRRDGREG DAAHLFDRLA ATGAPLHLLT DGAGAILLGR YLRSLEEGAL PPDEAARRQR
LRERFFAATA SLTLVTPPLT LAAFDEAFGP LIDHLPEGRA TLWVPSRGLD AKLHVGAYAR
SILHLICHGF ERGEEDGTDA PTRSFVGMPQ HVTGLPGRLT PRLAKLAVCR IAQPDASRPR
FTQADVSLSA DCHRRTLDRI RAIEAQRQGG TDDGENHARA AAGDGGRSRN AS
|
|---|
| |