| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3260 |
|---|
| Symbol | amiC |
|---|
| ID | 3721860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 316924 |
|---|
| End bp | 317985 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640072928 |
|---|
| Product | putative negative amidase regulator, AmiC |
|---|
| Protein accession | YP_354768 |
|---|
| Protein GI | 77465265 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.469072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAC GCATCGACCT TGGACTTCTC TACTCCCGCT CGGGCAGCTA CGCGCTGATC
TCGGACGCCT GCCGCACCGG GGCGCTGGCC GCCGTGGCCG AGGTGAATGC CGGGCCCTTC
GATCTGGAGC TGGTGCCGGT CGAGCGCGAT CCCGGTGGCA ACATCGACTT CTATGCCCCT
CTGTGCGAAG AACTTCTGGC CCATGAGGGG CTGCGTCACG TCGTGGGCTG CGTCACCTCC
TGGAGCCGCA AGGAGGTGAT CCCGACGCTG GAGAAGGCGC GTGGGACGCT CTGGTATGCG
GTGCCCTACG AGGGCTTCGA AGCCTCGGAC CATGTGGTCT ATACCCATGC CTGCCCGAAC
CAGCACCTGC TGCCGCTGCT CGACTGGGCC TTTCCGGCCT TCGGCCGCCG CGCCTACCTG
ACGGGGTCGA ACTACATCTG GGGCTGGGAG ATGAACCGGC TGGCGCGCGA GCGGATCGGG
GCAGCGGGCG GCAAGGTTCT GGGCGAACGC TACCTGCCCA TCGGATCGCT CGAGATCGAC
CGGATGATCG AGGAGATCCG CGCGACCGCG CCGGATTTCA TCCTGAATTC GCTGATCGGC
CCCTCCTCCT ATGCCTTCCT CAAGGCCTAT CAGGCGCTGG GGCGCGAGGA TGCCCGCTTC
CGTCCGGACC GCTGCCCGGT GATGTCCTGC AACCTCACCG AATGCGAGCT GCCCGCGCTG
GGGGATGCGG CCGAGGGGCT GATCGCCGCC GGACCCTACT TCCGCGGCGA GGGCCGGTTC
GGCTCGTCGC ACGAGGCGGC GGCCCATGCA GCGGTGATGG AGCTTGCACG CCTGCTCTCC
GGCCGTCCGG GCGCCGAGCG GCTTCCGCTT TCGCAGCTGC TCGCAGGGTC CCCTCCGGGC
ATCGTCGATC CGCAGACGCA TCACACCGCG CTGCCGGTCC TGATCTCACA GGTCTCGGGC
GGCCGGTTCA CGGTGCGCGA GCGCCTGCCC GCACGTCCCG GGGATCCCTA CCTGACCCAT
CCCGCGCCCG CACGCCCGGC CACGCTGCGG ATCGTGTCAT GA
|
|---|
| Protein sequence | MKRRIDLGLL YSRSGSYALI SDACRTGALA AVAEVNAGPF DLELVPVERD PGGNIDFYAP
LCEELLAHEG LRHVVGCVTS WSRKEVIPTL EKARGTLWYA VPYEGFEASD HVVYTHACPN
QHLLPLLDWA FPAFGRRAYL TGSNYIWGWE MNRLARERIG AAGGKVLGER YLPIGSLEID
RMIEEIRATA PDFILNSLIG PSSYAFLKAY QALGREDARF RPDRCPVMSC NLTECELPAL
GDAAEGLIAA GPYFRGEGRF GSSHEAAAHA AVMELARLLS GRPGAERLPL SQLLAGSPPG
IVDPQTHHTA LPVLISQVSG GRFTVRERLP ARPGDPYLTH PAPARPATLR IVS
|
|---|
| |