| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2867 |
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| Symbol | rpoN4 |
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| ID | 3720607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1533763 |
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| End bp | 1535037 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640071053 |
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| Product | sigma-54 factor family protein |
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| Protein accession | YP_352929 |
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| Protein GI | 77463425 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.147867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTCGA TGCAGCTCCG GCTGGGCCAG CGGCTGGCCC AGCGGGCCGT TCTCGTGCAG
CGGGCCGAGA TCCTTGAGGC GACCGGAACG GACTGGGCGG AGCGGATCGC GGCCGAGGCC
CAGCGGAACC CGTTCCTGCG GGTGAGGCAG CCGGCCACCG CCGCGCCGAT CCCCGAAAGC
GCAGCCCTGC CGCCCGACCT GCACGCCTGG CTCGGCTCGC AGATCCGCAT GGCCATGGCC
GATCCCGAGG ACCGGGCGCT GGCCTTCCGC CTGCTCGAGG CGCTGGAGCC CTCGGGCTGG
CTGGGCCAGC CTCTGTCGCG CCTCGCGCCC GGCGCCGAAG AGCAGGCGGC GCGGGTGCTC
CACCGCCTGC AGCAGATGGA GCCCGCCGGC ATCTTCGCCC GCGACCTGCG CGAGTGCCTC
ATGTTGCAGG CGCGCGACCG GGGACAGCTC GATCCCGCGA TGGCGGCCGT GCTGGATCGC
CTCGACTGTC TTGCCTCCGA CGGACCGGCA GCCGTGGCGC GCGCAGCCGG GCTCGAGGAG
CAGACGGTGC TCCGCTGCCT CGAGCTGATC CGGCGCATGG ATCCGAAACC GGGCGCTGCC
TTTGCCGCCG AAGACGCTCC CCTGCGCGAG CCCGACCTTA TCGCGCGCCG CACCGCCTCG
GGCTGGAGCG TCGAGCTGAA CCGCTCGCTT CTGCCGGAGG TCCGGGTGGC GCCCCTGCCG
GACGGCAGCC CGGCCGATGT CCGCCAGATG CATCAGGAGG CCCTGTCACT GGCAAAGGCG
ACCGGCTTGC GCGGCCGGAC CCTCCTTGCC GTGGGGGCGC TGGTGGTGGA GCGCCAGCGC
GCCTTTCTGG ATGAGGGGCC GGCCGCCCTC GTCGCCCTGG GGATCGGCGA GGCGGCCGAT
GCGCTGGCCC TGCACCCGAG CACGATCAGC CGCACGGTCA CTGGGTTGCT GATGGCGACC
CCGCGCGGGC TTGTGGCGGT GCGCGATCTC TTCTGCGCGC GGCTCGCGGA GGGCACCGGA
GCGCTCAGCG CACCGGCCCT TCAGGCCTTG ATCCGCGAGA CCATTGCCGC CGAGAGCGCT
CACGCGCCGC TGGAGGATGG CGAGATCGTC GAGGCGCTGG CCCGGCGCGG CATCCATGTC
GCGCGAAGAA CCGTGGCCAA GCACCGCACG CTCGCGGGTC TGCCGCCTGC CGCCGTGAGA
CGCAGGGCGG CTCCCTCGGG CTCGGAGGCA GTGGCCTTCG GCCGGCAGCC TGTCCCGCTC
GGCGGCAGGA ACTGA
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| Protein sequence | MVSMQLRLGQ RLAQRAVLVQ RAEILEATGT DWAERIAAEA QRNPFLRVRQ PATAAPIPES
AALPPDLHAW LGSQIRMAMA DPEDRALAFR LLEALEPSGW LGQPLSRLAP GAEEQAARVL
HRLQQMEPAG IFARDLRECL MLQARDRGQL DPAMAAVLDR LDCLASDGPA AVARAAGLEE
QTVLRCLELI RRMDPKPGAA FAAEDAPLRE PDLIARRTAS GWSVELNRSL LPEVRVAPLP
DGSPADVRQM HQEALSLAKA TGLRGRTLLA VGALVVERQR AFLDEGPAAL VALGIGEAAD
ALALHPSTIS RTVTGLLMAT PRGLVAVRDL FCARLAEGTG ALSAPALQAL IRETIAAESA
HAPLEDGEIV EALARRGIHV ARRTVAKHRT LAGLPPAAVR RRAAPSGSEA VAFGRQPVPL
GGRN
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