| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2856 |
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| Symbol | |
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| ID | 3720530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 1444233 |
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| End bp | 1446044 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640070976 |
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| Product | putative oligopeptide ABC transporter, periplasmic-binding protein |
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| Protein accession | YP_352855 |
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| Protein GI | 77463351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.481742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACAGG AATTCCGGTC CCGCCTGAGG GGCGCCGCGC TGGCTCTCGG GCTTGCCGTT
CTGGGCACGA CGCTGGCCGC CGAACCCCGG CACGGCATAG CTATGTATGG CGAACCGGCG
CTTCCACCGG ATTTTGTGTC TCTGCCATAT GCAAATCCCG ACGCGCCGAA GGGCGGCCGG
ATCGTGCTGG GCGAGACGGG CGGATTCGAT TCCCTCAACC CCTACATAGT TAAGGGCCGC
GCCCCCTATT CGCTCGCGCC GCTGACGGTC GAGACGCTGC TCGGCCGGTC GCTCGACGAG
CCCTTCACGC TCTACGGGCT TCTGGCCGAA TCGGTCGAGA CGGACCCTGC CCGGACCTGG
GTCGAATTCA CGCTGCGCGA GGGCGCGCGG TTCTCGGACG GCACGCCCGT GACGGTCGGG
GATGTGCTCT GGTCGTTCGA GATTCTCGGC ACGAAAGGGA TGCCGCGCTA CTGGGGCGCG
TGGCAGAAGA TCGCGAGCGC CGAGCAAACA GGCCCGCGTT CGGTCCGCTT CACCTTCTCC
GAGCAGGACC GCGAACTGCC GCTGGTGTTG GGTCTGCGCC CGATCCTGAA GAAGGCGCAG
TGGGAGGGCC GCGACTTCGG CTCCTCGGGC TTCGAGGCGC CGATCGGCTC GGGGCCCTAC
ATCCTCGAGA GCTTCGAGCC GGGCCGGGTG CTGCGCTACC GCCGGAACCC TGACTGGTGG
GGGCGCGACC TGCCCTTCAA CCGCGGCCTG CACAATCTCG ACGAGGTGGT GGTCGAGTAT
TTCGGCGATG CAAGCGTGGC CTTCGAGGCG TTCAAGGCCG GCGCCCTCTC GGTCTATCGC
GAGACGAGCG CCGCCCGCTG GGCCACCCAC TACGGGTTCC CGGCCGTGCA GAGCGGCGCG
ATGGTCAAGT CCGAGATCCC GCATGGCCGC CCGTCCGGAA TGGAGGGGCT GGTGATGAAC
ACGCGCCGCG CCCTTTTCGC GGACTGGCGC GTGCGCGAGG CGATGCTCTT GGCCTTCGAC
TTCGACCTCA TCAACCGCAC GCTGACCGGC GGCGCCGAGC CGCGGATCGC CTCCTACTTC
TCGAACTCCG CGCTCGGGAT GGAGGCGGGG GCGCCTGCCA CGGGGCGCGA GCGGGCGCTG
CTCGAGCCCT TTGCGGCCGA TCTCCTGCCC GGCACGCTCG ACGGCTATGC CCTGCCCGCG
ACGCACGGCG CCTCGAACCG CGGCAACCTC CGCAAGGCCG CCCGACTTCT CTCGGAGGCC
GGCTGGCGGA TCGAGGACGG GATGCTCGAA GGCCCGGGCG GCACCCCCTT CGCCTTCGAG
ATCCTGCTGC CGCAGGGCGC GGATGCGATG ATCGCGGCTT CGATCATCTA CCGACAGGCA
CTGACACGGC TCGGGATCTC GGCCCGCATC ACGACCGTCG ATCCGGCGCA GTTCAAGCAG
CGGGTCGACA ATCAGGATTT CGACATGACG AGCTTCCTGC GCTCGCTCAC CCTCTCGCCC
GGCAACGAGC AGCTCCTCTA CTGGTCGGCC GAGGACAAGG ATCTGCCCGG CTCGCGCAAC
CTGATGGGGA TGGAGAGCCC CGCCGCCGAG GCCGTGATCC GGCACATGCT GGCCACCGAC
GATGCCGAGG AGTTTCAAGC CTCCGTGAGG GCGCTCGACC GGGTCCTGAC GGCCGGTAGA
TATGTCATTC CGATGTGGTA TTCTCGGGTC TCCCGGCTGG CGCACGACAG GCACCTGCGC
TATCCGGCAA AAACACCCAT CTATGGCGAC TGGCCGGGCT TCCTGCCGGA CGTCTGGTGG
CAAGAAAAGT GA
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| Protein sequence | MIQEFRSRLR GAALALGLAV LGTTLAAEPR HGIAMYGEPA LPPDFVSLPY ANPDAPKGGR
IVLGETGGFD SLNPYIVKGR APYSLAPLTV ETLLGRSLDE PFTLYGLLAE SVETDPARTW
VEFTLREGAR FSDGTPVTVG DVLWSFEILG TKGMPRYWGA WQKIASAEQT GPRSVRFTFS
EQDRELPLVL GLRPILKKAQ WEGRDFGSSG FEAPIGSGPY ILESFEPGRV LRYRRNPDWW
GRDLPFNRGL HNLDEVVVEY FGDASVAFEA FKAGALSVYR ETSAARWATH YGFPAVQSGA
MVKSEIPHGR PSGMEGLVMN TRRALFADWR VREAMLLAFD FDLINRTLTG GAEPRIASYF
SNSALGMEAG APATGRERAL LEPFAADLLP GTLDGYALPA THGASNRGNL RKAARLLSEA
GWRIEDGMLE GPGGTPFAFE ILLPQGADAM IAASIIYRQA LTRLGISARI TTVDPAQFKQ
RVDNQDFDMT SFLRSLTLSP GNEQLLYWSA EDKDLPGSRN LMGMESPAAE AVIRHMLATD
DAEEFQASVR ALDRVLTAGR YVIPMWYSRV SRLAHDRHLR YPAKTPIYGD WPGFLPDVWW
QEK
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