| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2397 |
|---|
| Symbol | |
|---|
| ID | 3719994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1025030 |
|---|
| End bp | 1026049 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640070578 |
|---|
| Product | ABC putrescine transporter, periplasmic substrate-binding subunit |
|---|
| Protein accession | YP_352459 |
|---|
| Protein GI | 77462955 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.177339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACATC TCGCAGCCGC AGCCCTGCTG CTCGCCTCGA CCAGCCTCGC GGGGGCGGCG
GAGCTGAACC TCTACAACTG GGGCAACTAC ACGAGCGCCG AGCTGCTCGC GAAGTTCGAG
AAGGAGACCG GCATCAAGGT CACGGTCACC GATTACGACA GCAACGACAC GGCGCTGGCC
AAGATCGAGG CGGGGGGCCA CGGCTTCGAC CTCGTGGTGC CCTCGGCCAA CTATGTGGGC
ATCTTCCGCG ACAAGGGCCT TCTGACCGAG CTCGACCTCT CGAAGATCCC GAACCACGCC
AACATCGCCC CCGAATGGGC GGACGTGGCC TGGGATCCCG GCCGCGCGTA TTCGGTGCCG
TGGCGGTGGG GCACGACCGC GATCTCGGTG AATACGGCCG TCTACAAGGG CGACATCAAC
ACCTCGGCGG TCTGGCTGGA GGTGCCGGAC GAGCTGAAGG GCAAGGTCAA TGTCGTGCCC
GAGATGAACG ACGTGGTGGC GCTGGCCACG ATGTATGCGG GCGGCGAGCC CTGCTCGGAG
GATCTCGAGG TGCTGAAGAA GGCGCGCGAC CTGCTGATCG CGGCCAAGCC CGACTGGATC
TCGATGGATT ACGGCGCGAC GGAGAAACTG TCGAACAACG ACTGGGCGGC CTCGGTCAAC
TGGTCGGGCT CGTCGATGCG GGCGCGGCTG GCCAACCCGG ACGTGGCCTA TGGCTACCCC
AAGGAGGGCT TCATCACCTT CATGGATTCC GTGGCCCTGC TGCGGGATGC GAAGAATGTG
GAAGAGGCCT ACAAGTTCCT GAACTTCATC CTCGAGCCCG AGAATGCCGC CATGATCTCG
GCCTTCGCGC GCTACTCGCC GGGTGTCGCC GGCGCGGCGG ACTTCCTGCC CGAGGACATG
AAGACCGCCC CCGAGGTGGT GATCCCGCCC GAGTTCGCCG ACAAGGGCAT CTTCCTGCCG
GCCTGCAGCC CGAAGGCGCA GGAATATATC ACCGCGATCT GGACCGAGCT TCAGAAGTGA
|
|---|
| Protein sequence | MRHLAAAALL LASTSLAGAA ELNLYNWGNY TSAELLAKFE KETGIKVTVT DYDSNDTALA
KIEAGGHGFD LVVPSANYVG IFRDKGLLTE LDLSKIPNHA NIAPEWADVA WDPGRAYSVP
WRWGTTAISV NTAVYKGDIN TSAVWLEVPD ELKGKVNVVP EMNDVVALAT MYAGGEPCSE
DLEVLKKARD LLIAAKPDWI SMDYGATEKL SNNDWAASVN WSGSSMRARL ANPDVAYGYP
KEGFITFMDS VALLRDAKNV EEAYKFLNFI LEPENAAMIS AFARYSPGVA GAADFLPEDM
KTAPEVVIPP EFADKGIFLP ACSPKAQEYI TAIWTELQK
|
|---|
| |