Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2316 |
Symbol | dadA |
ID | 3719847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 937932 |
End bp | 939173 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640070489 |
Product | D-amino acid dehydrogenase |
Protein accession | YP_352371 |
Protein GI | 77462867 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.944178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCAGC ATCTTTCCTC GGACACGGTT GTCATCGGCG GAGGCGTGGT GGGTCTGACC ATCGCGCTGA CTGTCGCGCG ACGTCACCGC TCGGTCATCC TGCTCGACCC CGAAGAGCCG GGGTCGGGCG CCTCCTACGG CAATGCGGGC ACCATCGCCG ATTATGCGGT GCTGCCCGTG GGCACGCCCG ACGTGCTGCG GCAACTGCCC TCGCTGATGT TCGACCGGAA CTCACCGCTG GCGATCCGGC ACATGGCGCT GCCGTCGCTC GCGCCGTGGC TCGCGCGCTT CCTGCGCCAG TCGCTGCCCG CACCGGCGCG CCGCAATGCG CAGGCCATCG CGGCGCTTCT GGGCTCGGCC ACGCGAAGCT GGGAAGATCT GGCGGTCGAG GTGGAGGGCA CGGCGCTTCT GAACCGGCGC GGCTGCCTCT ATGCCTACGA GACCCCGCAG GCCGCCCGCG CCGCCGAGAC CGACATGACG TTCCGCCGCA CGCTGGGCGT GACAGTCGAG CTGCTCTCCG CGGCCGAGTT CGCCGCGATG GAGCCCTCGC TGCCGCCGAT GGCGGGCGCG GCCTATTTCC CGAAAGCCAT CTTCCTGTCG GATCCGGGCC GGATGGTGGC GCTGATCGCC GAGGCGGCGC GCAAGGCGGG GGTGCAGATC GTGAAGGCGC GCGCCACCGG TCTCGAGCGC CGGGTCGACG GGGTGATCGT TTCGGGCCGC GCCCTCCAGA TCCATGGACG GCGCGCAGTG ATCGCGGCGG GCGCGCATTC CCGGGCGCTC GCGCTGTGCG CCGGAGACCG GGTCCCGCTC GACACCGAAC GCGGCTACCA TGTCGAGTGG GACATGGCGC AACCGCCGCT CACGCGGCCC ACCTGCCCCA CCGCGCGCGG CTTCTATCTC TGCCCGATGG CCGGGCGGCT GCGCGTCGCG GGCACGGTCG AGCTGGGTGG CCTTACCGCC CGGCCCTCGC CGCACCGGAT CGCGCGGCTG GTGGCCGGCG CCCGCGCGAT CTTCCCCCAC CTGCCCGAGC CCACGCGCAG CTGGATGGGT TTCCGGCCCT CGATGCCCGA CAGCCTGCCG GTGATCGGCC CCTCGGCGGC CGGCCCCGAG ATCCTGCATG CCTACGGGCA CGGCCATATC GGCCTCACCC TCGCCCCGAT CACGGCACGG ATCGTGGCCG ACCTGCTCGA TGCGAAGACA CCGGAGCTCG ACATCGCGCC CTATCTGCCG ACGCGGTTCT GA
|
Protein sequence | MIQHLSSDTV VIGGGVVGLT IALTVARRHR SVILLDPEEP GSGASYGNAG TIADYAVLPV GTPDVLRQLP SLMFDRNSPL AIRHMALPSL APWLARFLRQ SLPAPARRNA QAIAALLGSA TRSWEDLAVE VEGTALLNRR GCLYAYETPQ AARAAETDMT FRRTLGVTVE LLSAAEFAAM EPSLPPMAGA AYFPKAIFLS DPGRMVALIA EAARKAGVQI VKARATGLER RVDGVIVSGR ALQIHGRRAV IAAGAHSRAL ALCAGDRVPL DTERGYHVEW DMAQPPLTRP TCPTARGFYL CPMAGRLRVA GTVELGGLTA RPSPHRIARL VAGARAIFPH LPEPTRSWMG FRPSMPDSLP VIGPSAAGPE ILHAYGHGHI GLTLAPITAR IVADLLDAKT PELDIAPYLP TRF
|
| |