| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2223 |
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| Symbol | |
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| ID | 3719753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 834809 |
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| End bp | 837955 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640070396 |
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| Product | AcrB/AcrD/AcrF multidrug efflux pump |
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| Protein accession | YP_352280 |
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| Protein GI | 77462776 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.445176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACGC TTCCCGAACC CGACGAGCGC GAGCTTGCCC ATTCCAACAC GGCGCTCTTC
ATCCGCCGTC CGATCCTCGC CTTCGTGCTG AATGCGCTGA TCCTGATCGC GGGGCTGGCC
GCGCTCTACG GCGCCGACGT GCGCGAGCTG CCCGACGTGG ACAGCCCCGT CATCACCGTC
ACCACGACCT TCGACGGCGC CTCTTCCGAG ACGATCGATC AGGAAGTGAC CGACGAGATC
GAGGGCGCGG CCTCGCGCGT GGCGGGGGTG AAGTCCATCT CCTCCAGCTC GCGCTTCGGG
CGCAGTCAGG TGACGGTTGA GTTCAACGAC GACACCAATC TCGACGTGGC CGCCAGCGAC
ATGCGCGATT CGATCTCGCG CATCCGCAAC AATCTGCCCG ACGACGCCGA CGAACCGCGC
ATCGTGAAGG CCGATGCCAA TTCCGAGGCG GTGATGCGGG TGGCCGTGAC CTCGGCCCGC
CGCTCGGCGC AGGAGCTGAC CCAGATCGTC GAGGACCAGA TCGAGAGCCG GCTTCTCGCC
GCTCCGGGCG TGGCGGACCT CCAGATCTAC GGCGACCGCA CGCCCATCTT CCGCGTCGAT
GTGGATCAGA TGCTTCTGGC CTCGCGGGGG CTGACGCTCG CCGATCTGCG CACCGCCCTC
GGCAATGTGG CCTACGATGC GCCGGCGGGC TCGCTCACCT CGGACCGCCA GAGCCTCGTG
GTCCGCACGA CCGCGACCGT CACCACCCCC GCAGCCTTCG AGGCGCTCGA GATCGCGCCC
GACGTGCGGC TGGGCGATGT GGCCACGGTC GAGCTCGGCC CCGAACCCGG CGCCTCCTAT
CTGCGGGCGA ACGGCGAGAA CGGGGTGGGC CTCGGGATCA TCCGGCAGGC CCAGAGCAAC
ACGCTCGAGA TCTCGAAGGC GGTGCGCGAG ATCGTGGCGG GGCTGCAGGC CGACCTGCCG
CAGGATGTCC GCATCTTCGT GACCTCGGAC GACGCGACCT TCATCAACGG CGCGATCCAC
GAGGTCGAGA TCGCGCTCGG CCTGTCGGTC CTGATCGTGG TGGCGATCAT CTACCTCTTC
CTGCGCGACA TGCGCGCCAC CCTGATCCCC ACGCTGGCCA TCCCCGTGGC ACTGGTGGGC
ACGCTCGCCG CCATCTGGAT CGCGGGCTTC TCGATCAACA TCCTCACGCT CCTGGCCCTT
GTGCTGGCCA CCGGGATGGT GGTGGACGAT GCCATCGTCG TGCTGGAGAA CATCGTGCGC
TGGCGGGCGC AGGGGATCGG GCCGCGGGCC GCGGCCGTGC TCGGGACCCA GCAGGTCTTC
TTCGCCGTCA TCGCCACGAC GACGACGCTG GCCGCCGTCT TCATCCCGCT CTCCTTCCTG
CCCGGCCAGA CCGGCGGCCT CTTCCGCGAG TTCGGCTTCA CGCTGGCGAT CTCGGTCCTG
CTCTCGTCGG TGACGGCGCT GAGCCTCTGC CCCGTCCTCG CCAGCCGCTT CCTGCGCGCG
GGCGACGAGA GCCACGCCCG CGGCCCGGTG GTCTGGCTCG GCCGGACGCT CGCGGCCTTC
TACCGCCGGA CGCTGCACTG GGCGCTCGAC GCGCCAGCCG TCACGCTGGC CATTGCCACG
GGCTTCGCGC TGACCGCCGT CTTCCTCTTC GGCACGCTGA AGCAGGAGCT GACCCCTTCC
GAAGACCGGT CGGTGATCCT GATGTCGGTG CAGGCGCCGC AGGGCGTGGC GCTCGAATAT
ACCGACGGCA AGATGCGCGA GATCGAGGAT CTGATCGCCC CCCTGCGCGA GAAGGGCGAG
GTCTTCAGCG TCTTCGCCAT CGCGGGCTCG GGCAGCCGCG ACAACCGCGG CTTCATGGTG
ATCTCGCTCG CCCCGTGGGA GGACCGCGAC CGCAGCCAGC AGGAGATCGC AGCCGAGCTG
AACGAGGGGT TGAGCCGCAT CGTGGGCATC CGCGCCTTCG CCATCCAGCC GAACTCGCTT
GGCGTCCGCG GCGCGGGCCA GGGGCTGAGC TTCGCGGTGG TGGGCGACAG CTACGCCCGG
CTGGCCGAAG GCGCGCAGGA ACTCGTCGAC CGGATGGAGG AGAACCCGGC CTTCGGCCAG
GTGCGGCTCG GCTACGAGAC GACGCAGCCG CAACTCTTCA TCGAGGTCGA CCGCACCCGC
GCCTCCGACC TCGGGATCGA GATCACGGGG CTCGGCGAGG CGCTGCAGGC GGTGCTCGAT
GGCCGCACGG TGGGCACGGT CTTCCTCGAC GATGCGAGCT ACGACATCCA GATGCTCTCC
ACCACCGATC CGGTGAACGA TCCCGGCGAC CTCGAACGGA TCTTCGTGCA GTCGGGCGAC
GGGCAGATGG TGCCGATCTC GAGCTTCGTG ACCCTCACCG AACGGGCCGT GGCGCCCGAG
CTTTCGCGCG AGGGGCAGCT GCGGGCGGTG CCGATCTCGG CCAGCCTCAC GCCCGAGCTG
GCGCTCGGCG AGGCTCTGGA AGAGGTGGAG CGGCTGGCGG CCGACATCCT GCCCGGCGAC
AGCCGGATCG AGCCCCTGGC CGAGGCCGCG ACATTGGGCG AGACCTCCTC CGGGCTGACG
GCCACCTTCG GCTTCGCCAT CGTGATCGTG CTTCTGGTGC TGGCCGCGCA GTTCGAGAGC
TTCGTCTCGG CCTTCATCGT GATGGCGACC GTGCCGCTCG GGCTCGCCTG CGCGATCTTC
GCGCTGGTGG CCACCGGCGG CAGCCTCAAC GTCTACAGCC AGATCGGGCT TGTCCTGCTG
GTGGGGATCA TGGCCAAGAA CGGCATCCTG ATCGTCGAGT TCGCGAACCA GCTGCGCGAC
GAGGGCCTGC CGGTGCGGCG GGCCATCGAG GATGCCTGCG CGATCCGCCT GCGCCCGGTG
ATGATGACCA TGATCGCCAC CGTGCTGGGA GGGCTTCCTT TGGTCTTCGC GGCCGGCGCC
GGCGCCGAGG CGCGCGAGGT GCTGGGCTGG ATCATCGTGG GGGGCCTCGG CCTTGCCACG
GTGGCCACGC TCTACCTCAC GCCGGTGGCC TATCTCCTGC TCGCAGGCCT TTCGCGGCCG
AAGGCCGAGG AGCAGACCCG CCTCCTGCGC GAGCTGCACG ACGCCACGCG GATGCCGCCC
CCGGTCGAGG GCCGGCCGGC CGAATGA
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| Protein sequence | MSTLPEPDER ELAHSNTALF IRRPILAFVL NALILIAGLA ALYGADVREL PDVDSPVITV
TTTFDGASSE TIDQEVTDEI EGAASRVAGV KSISSSSRFG RSQVTVEFND DTNLDVAASD
MRDSISRIRN NLPDDADEPR IVKADANSEA VMRVAVTSAR RSAQELTQIV EDQIESRLLA
APGVADLQIY GDRTPIFRVD VDQMLLASRG LTLADLRTAL GNVAYDAPAG SLTSDRQSLV
VRTTATVTTP AAFEALEIAP DVRLGDVATV ELGPEPGASY LRANGENGVG LGIIRQAQSN
TLEISKAVRE IVAGLQADLP QDVRIFVTSD DATFINGAIH EVEIALGLSV LIVVAIIYLF
LRDMRATLIP TLAIPVALVG TLAAIWIAGF SINILTLLAL VLATGMVVDD AIVVLENIVR
WRAQGIGPRA AAVLGTQQVF FAVIATTTTL AAVFIPLSFL PGQTGGLFRE FGFTLAISVL
LSSVTALSLC PVLASRFLRA GDESHARGPV VWLGRTLAAF YRRTLHWALD APAVTLAIAT
GFALTAVFLF GTLKQELTPS EDRSVILMSV QAPQGVALEY TDGKMREIED LIAPLREKGE
VFSVFAIAGS GSRDNRGFMV ISLAPWEDRD RSQQEIAAEL NEGLSRIVGI RAFAIQPNSL
GVRGAGQGLS FAVVGDSYAR LAEGAQELVD RMEENPAFGQ VRLGYETTQP QLFIEVDRTR
ASDLGIEITG LGEALQAVLD GRTVGTVFLD DASYDIQMLS TTDPVNDPGD LERIFVQSGD
GQMVPISSFV TLTERAVAPE LSREGQLRAV PISASLTPEL ALGEALEEVE RLAADILPGD
SRIEPLAEAA TLGETSSGLT ATFGFAIVIV LLVLAAQFES FVSAFIVMAT VPLGLACAIF
ALVATGGSLN VYSQIGLVLL VGIMAKNGIL IVEFANQLRD EGLPVRRAIE DACAIRLRPV
MMTMIATVLG GLPLVFAAGA GAEAREVLGW IIVGGLGLAT VATLYLTPVA YLLLAGLSRP
KAEEQTRLLR ELHDATRMPP PVEGRPAE
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