| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2178 |
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| Symbol | topA |
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| ID | 3719648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 782378 |
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| End bp | 785032 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640070347 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_352231 |
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| Protein GI | 77462727 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTCG TCGTCGTCGA AAGCCCGGCC AAGGCCAAGA CAATCAACAA ATACCTGGGC
TCCGACTATA CGGTTCTGGC CTCCTATGGC CATGTCCGCG ACCTGCCTCC CAAGGACGGA
TCGGTCGATC CCGAGCATGA ATTCGCCATG ACCTGGGAGG TCGCGGCGGA TTCGAAGAAG
CATGTCCGCG CCATCGCCGA CGCGCTGAAG ACCGACGACA CGCTCATTCT CGCAACCGAC
CCAGACCGCG AGGGCGAGGC GATCTCGTGG CACCTGCAGG AGGCGCTGGC CTCCTCGCTG
AAGAAGGGCA AGACCGTCCG CCGCGTGACC TTCAACGCGA TCACCAAATC GGCGGTGACC
GAGGCGATGA AGGCTCCGCG CGAGGTCGAT ACCGCGCTGG TCGAGGCCTA TCTGGCCCGC
CGGGCGCTCG ACTATCTGGT GGGCTTCACC CTCTCGCCGG TGCTCTGGCG GAAGCTGCCG
GGGGCGAAAT CGGCGGGCCG GGTGCAGTCC GTGTGCCTGC GGCTCATCGT CGAGCGCGAG
ATGGAGATCG AGGCCTTCCG CGCCCGCGAA TTCTGGACCG TCTCGGCCGT TCTCGCCACC
CCGCGCGGGC AGGAATTCGA GGCCCGTCTG ACCGTGCTCG GCGGAAAGAA GCTCGAGAAG
TTCGACCTGG CCACCTCCGA GGCGGCGGAA CTCGCCGTGC AGGCCGTGAC CTCGCGGCCG
CTGAAGGTGG CCTCGGTCGA GGCCAAGCCC GCGAGCCGGA ACCCCTCGGC CCCGTTCATG
ACCTCGACCC TCCAGCAGGA GGCGTCGCGC AAGTTCGGCA TGGGCGCGAA ACAGTGCATG
TCGGCGGCGC AAAGGCTCTA TGAGGCGGGC CACATCACCT ACATGCGGAC CGACGGCATC
GACATGGCGC CCGAGGCCGT GATGGCCGCG CGCGACGAGA TCAAGCGGCG CTTCGGGGCG
AACTACGTGC CCGACAGCCC GCGCATGTAC AAGAACAAGG CCAAGAACGC GCAGGAAGCC
CACGAGTGCA TCCGGCCCAC CGACATGTCG GCCTCGCCCG AGAAGCTGGG GCTGACCGAC
ACCGACCAGC GCAAGCTCTA CGAGCTGATC TGGAAGCGGA CGCTGGCCAG CCAGATGGCC
GCGGCGCGGC TCGAGCGGAC CACGGTCGAG ATCGCCTCGC CCGACGGGCA GGTGGGCCTG
CGCGCCACGG GTCAGGTCGT GCTCTTCGAC GGCTTCCTCA AGGTCTACGA GGAGGGGCGC
GATGACCGCA GCGACGGCGA CGAGGACGAT GAGGGCCGCC TGCCGCAGAT CATGGCGAAC
GAGGCGGTGG AAAAGAAATC CATCACGCCC GAGCAGCACC ACACCCAGCC GCCGCCGCGC
TATACCGAGG CGACGCTGGT CAAGCGGATG GAGGAGCTGG GCATCGGCCG GCCCTCGACC
TATGCCAGCA TCGTCTCGAC GATCCAGGAC CGGGAATATG TCCGCAAGGA CAAGAATCGG
CTGATCCCCG AGGACAAGGG GCGGCTGGTC ACGGCCTTCC TCGCGAACTT CTTCCGCAAA
TATGTGGAAT ACGATTTCAC CGCCGATCTC GAGGGCGAAC TCGACGACGT CTCGGCGGGC
GAGCGGAACT ACAAGGAAGT GCTCGCGCGC TTCTGGCGCG ACTTCTCGGC CGCCGTGGCC
GAGACGGCCG ATCTGCGCAT CGGCGAGGTG CTCGACAAGC TCGACGAGTT CCTCGCCCCC
CATCTCTATC CGCCGCGGCC CGACGGGTCG GATCCGCGGA TCTGCCCGAC CTGCGGCTCG
GGGCGTCTGC ATCTGAAGAC GGCGCGGGGC GGCGGGGCCT TCATCGGCTG CGGCAACTAT
CCCGACTGCC GCTACACGCG GCCGATCTCG GTCACGGGCG ACGAGGAGAA TGCGATCTCG
CCCGACGGCA AGCTTCTGGG CCATGACGAG GACGGCGCGC CGATCTCGCT GCGCTCGGGC
CGGTTCGGGC CCTACGTCCA GAAGGGCGAG GTCACGGCCG AGGTGCCGAA ACCGCCGCGG
GCGAGCCTGC CCAAGGGCTG GGCGCCCGAC ACGGTCGATC TCGACCGCGC GCTGATGCTG
CTGAACCTGC CGCGCCTCGT GGGCAGCCAC CCCGAGGACG GCCAGCCGGT CGAGGCGGCC
ATCGGCCGCT ATGGGCCTTA CGTCAAGCAT GGCTCGACCT ATGCGAACCT GCCGGATGTG
GAGGAGGTCT TCACCATCGG CATGAACCGC GCGGTCGAGG TGCTGGCGCA GAAGGCGGCC
GGCCGCCGGG GCGCCTCGGC GCCGGCGCAG CCGATCAAGG AGCTGGGCGA GCATCCCGAC
GGCGGCCTCC TTGCCGTGAT GCCGGGCCGC TACGGGCCCT ACGTCAAGTG GGGCAAGGTC
AATGCCACGA TCCCGAAAGG GATCGAGCCC GAGGCGATCA CCCTTGAGGA AGCTCTGGCG
CTGGTGGCCG AGAAGGCCGG CAAGGCGCCG AAGAAGAAGG CGCCCGCCCG GAAGGCCAAG
GCCGAGGAGG GAGCGCCGAA GAAGGCTGCG CCCAAGAAGG CCGCCGCCAA GACGACCAAG
ACGGCCGCCA AGAAGCCGGC TGCCGCGAAA TCCACGGCCA AGAAGAAGGC GGCGCCGGAT
ACCGACGCCG CCTGA
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| Protein sequence | MAVVVVESPA KAKTINKYLG SDYTVLASYG HVRDLPPKDG SVDPEHEFAM TWEVAADSKK
HVRAIADALK TDDTLILATD PDREGEAISW HLQEALASSL KKGKTVRRVT FNAITKSAVT
EAMKAPREVD TALVEAYLAR RALDYLVGFT LSPVLWRKLP GAKSAGRVQS VCLRLIVERE
MEIEAFRARE FWTVSAVLAT PRGQEFEARL TVLGGKKLEK FDLATSEAAE LAVQAVTSRP
LKVASVEAKP ASRNPSAPFM TSTLQQEASR KFGMGAKQCM SAAQRLYEAG HITYMRTDGI
DMAPEAVMAA RDEIKRRFGA NYVPDSPRMY KNKAKNAQEA HECIRPTDMS ASPEKLGLTD
TDQRKLYELI WKRTLASQMA AARLERTTVE IASPDGQVGL RATGQVVLFD GFLKVYEEGR
DDRSDGDEDD EGRLPQIMAN EAVEKKSITP EQHHTQPPPR YTEATLVKRM EELGIGRPST
YASIVSTIQD REYVRKDKNR LIPEDKGRLV TAFLANFFRK YVEYDFTADL EGELDDVSAG
ERNYKEVLAR FWRDFSAAVA ETADLRIGEV LDKLDEFLAP HLYPPRPDGS DPRICPTCGS
GRLHLKTARG GGAFIGCGNY PDCRYTRPIS VTGDEENAIS PDGKLLGHDE DGAPISLRSG
RFGPYVQKGE VTAEVPKPPR ASLPKGWAPD TVDLDRALML LNLPRLVGSH PEDGQPVEAA
IGRYGPYVKH GSTYANLPDV EEVFTIGMNR AVEVLAQKAA GRRGASAPAQ PIKELGEHPD
GGLLAVMPGR YGPYVKWGKV NATIPKGIEP EAITLEEALA LVAEKAGKAP KKKAPARKAK
AEEGAPKKAA PKKAAAKTTK TAAKKPAAAK STAKKKAAPD TDAA
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