| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2048 |
|---|
| Symbol | |
|---|
| ID | 3719438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 644180 |
|---|
| End bp | 644698 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640070212 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_352100 |
|---|
| Protein GI | 77462596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02256] integrative and conjugative element protein, VC0181 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.242028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGGT CTGACCGGCA TTTCACATCC GATTCTGGGG CGACGGTTAC TTTAACTGCC
AGAGCATTCG CGAAAATGGC CGAGTTCGCT GCCAAACGAT CTCAACGCGA GACCGGAGGT
ATACTCATTG GTCATTATTC AGAGGATCTG ACGATCGCCA GAATAGAAGC CGCGAGTGAC
GAGCCGCCAG ACTCGCGTGC AGGTCGGACT TGGTTCGTGC GTGGCCAAGT AGGGCTCGCC
GAGATATTGC AACGGGCTTG GCGTGAGGGG CGCTACTATT TGGGTGAATG GCATTCTCAC
CCCGGAGCCA GCCCTGCACC GAGCGGCCCG GACTTGTCCG CCATTGCAAA GATGGCGCGT
CACCCGACCT TCATTTGCCA CCGTCCAATT CTGGTTATCA TCGGTGGCAA TTTCCATCAA
CAACCGCTCT TGTCCGCCAC TTTGGCTGCC AAAACAGGCG TTACAACTCA GCTGCGTGCG
GAACTGTACT CCAATGAGCA TGAACGACTG CTTCGGTGA
|
|---|
| Protein sequence | MDRSDRHFTS DSGATVTLTA RAFAKMAEFA AKRSQRETGG ILIGHYSEDL TIARIEAASD
EPPDSRAGRT WFVRGQVGLA EILQRAWREG RYYLGEWHSH PGASPAPSGP DLSAIAKMAR
HPTFICHRPI LVIIGGNFHQ QPLLSATLAA KTGVTTQLRA ELYSNEHERL LR
|
|---|
| |