Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2006 |
Symbol | amsA |
ID | 3719339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 606221 |
End bp | 608203 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640070169 |
Product | hypothetical protein |
Protein accession | YP_352057 |
Protein GI | 77462553 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0368531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGGC TGGTCCGTCT GGCGGCTGTG CTCTTCGGGC TCGCGGCCCT GTTCCTCGTG GCCCTCGTGC TCATGCCCCG CGAGCGGGTG GCCGAGCTTG CGGCCCGCGA GTTCGAGGCC GCGACCGGCC GTGACCTGAC GATTTCGGGC GATGTGCGGC CCTCGATCTG GCCGCGCCTC GGCGTGCGCA CGGGGCCTGT CACCGTGGCC AACGCGCCCT GGACCGACGA GGGGCCGATG CTCGAGGCGC GCTCGCTCGA GATCGGGCTC GACACGCTCG CGCTCATGAG CGGCGCCTGG CGCATCAGCC GGATCGCGCT CGAGGAGCCG GTGATCCGGC TCGAACGGGA TGCGGAGGGC CGGGCCAACT GGGATCTCTC GTCCCCGCCG CGCGGGGCGG AGGGCCGCGC CGCCGAAGGC CGAGCCAGCC CGGCGCCGGC CTCGGCCCAG GCGGGCTTTC CGCTCTTCTC GCTCGACGAG GGGCTGGTCA CCGGGGGACG CGTGCTCTGG ATCGACCGGG CGGCGGGCAC CCGCACCGAG ATCTCGGGGC TCGACCTGCG CGTGAGCCTT CCCGAAGCGG GCGGGCCTGC GGATCTCACC CTCTCCGGAC AGGCGAACGG CCACGGCTTT GCCGTCGAGG GGCGGCTCGC CGAGGCGGGC ACGAGCCTTG CCGGCCGCGT GGCGCCGGTG CGCCTGTCGC TGGTCACGGG CGCGGCCCGG ATCGGCTTCG ACGGCGAAGC GGGCAGCGCT CCGCCCATGG CCGAGGGCAC CATCGACGCG GCCCTCGGCG ATCTGGGCGA TCTGGCGGCG CTCTTCGGTC AGGACCGCCC GACCTTGCCC GAGGGGCTGG GCCGGCGCCA GATCGCTCTG ACGGGCGGGC TTACCCTGGC CGAAGGCGGC ACGCTCCATC TGCGGAACGG GCAGGTGACG GCCGACAGCA ACCGTCTGGC CGTCGAGGCG GACCTGATCC CGCAGGGCGA GCGTCCGAAG CTCGAGGCGA ACCTGCGCGC CGAGACGCTG AACCTCGCGA GCCTTTCCGC CGGTGGCGGC GGCACGGGCG GCGGAGGCGG CGCAGGCAAG GGCTGGTCGC GCCAGCCCAT CGATGTGAGC GCGCTTTCCG CGCTCGATCT GGGCCTTGCG CTCTCGGCGG GAAGCGTCGA TTTCGGCCGG CTGAAGCTCG GGGCCACGAA GGCGATCCTG ACGCTCGACC GGGCCCGGCT GGTGGCCGAC CTGCGCGAGG TCGCGGCCTA TGGAGGTACC CTCTCGGGCG AGCTGATCGT GAACGGCCGG CAGGGGCTGT CGGTGGGCGC GGACCTCACC CTCGCGGGCC TGCAGACCGA GCCGTTCCTC GGCGATCTGG CGGACTTCGA CCGGCTTGCC ACGCAGGGCG ACCTGCGGCT GAAGCTGCTG GCCGCGGGCC CGCACGAGGA GGCGCTGATG CAGAGCCTCT CGGGCACGGG CTCGGTCCGG TTCGGCAAGG GCGAGCTGCG CGGGCTCGAC ATCGCGCGGA TGGTGCGGAC CCTCGATGCG GGCTCGGTGG GGCAGGGGAC CCGGACGATC TTCGACCGCA TGGGCGCGAG CTTCACCCTC GAGAAGGGCG TGCTGCGGAA CGAGGATCTG ACGCTCGAGG CGCCGCTGAT GCGCGCCACC GGCAAGGGGC AGGTGGGGAT CGGCGCGCGG ACGCTCGACT ATCGGCTGCT GCCCACGCTC CTGCCGCAGG CCGACGGCAC CGGCGGGGTG AGCGTGCCGC TCCTCGTCTC CGGCCCCTGG GCCAGCCCGC GCTACCGGCT GGATCTCGAT GCGCTGGTGC GCCAGCCCGT GGGGCAAAAG GTGAAGGAGC GGCTGGAAGA GGAAGCGGCC GAGCGTCTGG GCGTGGTGCC GGAGGAGGGC GAGAGCCTCG AGGAGGCTGC CAAGCGCCGC GCCCGCGAGG CCGTGCAGGG CGAGGCCGGA CGCGCCCTCA ACCGGCTCTT CGGCGGAAAC TGA
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Protein sequence | MRWLVRLAAV LFGLAALFLV ALVLMPRERV AELAAREFEA ATGRDLTISG DVRPSIWPRL GVRTGPVTVA NAPWTDEGPM LEARSLEIGL DTLALMSGAW RISRIALEEP VIRLERDAEG RANWDLSSPP RGAEGRAAEG RASPAPASAQ AGFPLFSLDE GLVTGGRVLW IDRAAGTRTE ISGLDLRVSL PEAGGPADLT LSGQANGHGF AVEGRLAEAG TSLAGRVAPV RLSLVTGAAR IGFDGEAGSA PPMAEGTIDA ALGDLGDLAA LFGQDRPTLP EGLGRRQIAL TGGLTLAEGG TLHLRNGQVT ADSNRLAVEA DLIPQGERPK LEANLRAETL NLASLSAGGG GTGGGGGAGK GWSRQPIDVS ALSALDLGLA LSAGSVDFGR LKLGATKAIL TLDRARLVAD LREVAAYGGT LSGELIVNGR QGLSVGADLT LAGLQTEPFL GDLADFDRLA TQGDLRLKLL AAGPHEEALM QSLSGTGSVR FGKGELRGLD IARMVRTLDA GSVGQGTRTI FDRMGASFTL EKGVLRNEDL TLEAPLMRAT GKGQVGIGAR TLDYRLLPTL LPQADGTGGV SVPLLVSGPW ASPRYRLDLD ALVRQPVGQK VKERLEEEAA ERLGVVPEEG ESLEEAAKRR AREAVQGEAG RALNRLFGGN
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