| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1440 |
|---|
| Symbol | |
|---|
| ID | 3718773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 20618 |
|---|
| End bp | 22717 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640069587 |
|---|
| Product | TonB dependent, hydroxamate-type ferrisiderophore, outer membrane receptor |
|---|
| Protein accession | YP_351482 |
|---|
| Protein GI | 77461978 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.453975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA AACACCGGTC GATGCTGCTC GCAGGCGCGA GCACCATTGC TCTGGCCCCG
GCCGCCCTCT TCGCCCAGGA GGCGATCAAG CTCGACGCGA TCGTGGTCAC GGCCACCACC
GACGTCACCA CTCAGGCCGA TGGCTACAAG GCCGACTACA ACCAGTCGGC CACCAAATCC
GACACGCCCG TGGCCGAGAC GACCCAGTCG GTCTCGGTCG TGACGGCAGA GCAGATCAGG
GATCAGGGCG CGGAAACCCT CGGGCAGGCG CTGCGCTACA GCCCGGGCGT GCTCGGCGAC
CCTTACGGCG TCGATCCGCG CTTCGACAGC CCCACCATCC GCGGCTTCGA GGCGCGCGGC
TCGCAATATG TCAACGGCCT GCGGCAGCTG CGCTACATGG GCGCCCCGGC CTACGAGACC
TTCGCGCTGC AGCAGATCGA GGTGCTGAAC GGTCCCAACT CCTCGCTCTA TGGCGCGGGC
TCGCCGGCCG GGATCATCAA CCAGGTCCAG AAGCGCGCGC AGGGCTTCGA CTTCGGCGAA
CTGGGCGTCG GCCTCGACGA CAACGGCTCG CGCCAGAGCT TCTTCGACTG GAACCGCACG
GTGAGCGACA CGCTCTCGTT CCGCGCGACC GGGATCGTCA AGGACTACGA GAGCCAGGTG
GAGGAGATCG GCCTCGAACG CGGATATCTG GGCCTCGCCG CCCGCTGGAA GCCCACCGAC
CGCACCACGC TCGACATCAT CTCCTCCTAT ACCGACGACG CGCCGACTTC GCCGCCGGGC
ATTCCCTTCG CGCTCACCGG GCAAGGGAAC GACAAGTATC TGCGCGAGCT CTACACCGGC
GAGCCGGGCT GGGACGACCA TGACCGCCAG ATCTTCAACA TCGGCTACGA GCTGAGCCAC
GAGTTCGACA GCGGCTGGAC CTTCAGCCAG GGCTTCCGCT ACGAGAAGTT CGACTGGGAA
TATACCGGCC ATTATGTGAC CGGCATCGAC GCCAGCGGCA CCGGGATCAC CCGGGGCGCC
AACTATCAGC GCGAGAACAC CACCGGCCTG AGCCTCGATT CGCGGCTTGC CGGAGAGGTG
CTGACCGGCG GCATGGAGCA CAAGCTGCTC TTCGGGCTCG ACCTGCGCAA ATACGATGCC
GACACCGTCA CCGAGTTCTA CAACGCCGAA GGCGGCGTCA CGGACCTCGA CTGGCGCAAT
CCTGTCTATG GCGGTGTTCC CACCGGCGCG CCCTGGTATG TCAGCACGCC CGACGTGACG
CAGACCCAGA TCGGGCTCTA TGCGCAGGAC GAGATCACCG CCGGGCGCTG GCGCGGGTCG
TTCGCGCTGC GCCACGACTG GTCGAAGCAG GAGGGCACCA CCTACACGAA CTTCGCGGGC
GAAGGCGAGA TCGACCAGTC GGACAAGGCG CTGTCGGGCC GCGCGGGCCT CGGCTACGAG
ATCGCACCCG GCGCGCTCGT CTATGCCAAC TACTCCACCT CCTTCGACCC GGAGATCGGC
GTGGACGGCG CGGGTGAGCA GCTGGAGCCG ACGACCGGCA AGCAATGGGA GCTGGGCGTG
AAATATCAGC CCGACAGCTT CAACGCGCTC TTCACCGCGG CGATCTACGA TCTGCGGCAG
GAGAACCTGA CGGTGAATCT CGGCGGGGCC GAGGGCCGTC GTCAGGTCGG CGAGGTCAAG
TCCTCCGGCC TCGAACTCGG CGCGGTGGGC GAGCTGGCAC CGGGGCTGAA CCTGCGCGCA
AGCTACGCCT ACAACGACAC CGAGCAGGTC GATCCGAGCG GCGCCAACGA CGGCAACGAG
ATGCCCAACG CGCCGCGCCA TCTGGCGAGC CTCTGGCTCG ACAAGGCCTT CGACAACGGC
GTGAGCCTCG GCGGCGGCCT GCGCTACATC GGCGAGCGCG AGGGCGATCT GGCCAACCTC
TATTCGCTCG AGTCCGTGAC GCTGCTCGAC CTCGCCGTGG GCTACAGCCG CGAGAACATG
GACGCCTCGA TCAACCTCAA CAACCTGTCC GACGAGGTCT ACCTCGCCAA CTGCGGCTCT
TTCGGCTGCT ACTACGGCGA GGGCCGGACG ATCTCGGCCA AGATCAGCTA CAAGTGGTAG
|
|---|
| Protein sequence | MKTKHRSMLL AGASTIALAP AALFAQEAIK LDAIVVTATT DVTTQADGYK ADYNQSATKS
DTPVAETTQS VSVVTAEQIR DQGAETLGQA LRYSPGVLGD PYGVDPRFDS PTIRGFEARG
SQYVNGLRQL RYMGAPAYET FALQQIEVLN GPNSSLYGAG SPAGIINQVQ KRAQGFDFGE
LGVGLDDNGS RQSFFDWNRT VSDTLSFRAT GIVKDYESQV EEIGLERGYL GLAARWKPTD
RTTLDIISSY TDDAPTSPPG IPFALTGQGN DKYLRELYTG EPGWDDHDRQ IFNIGYELSH
EFDSGWTFSQ GFRYEKFDWE YTGHYVTGID ASGTGITRGA NYQRENTTGL SLDSRLAGEV
LTGGMEHKLL FGLDLRKYDA DTVTEFYNAE GGVTDLDWRN PVYGGVPTGA PWYVSTPDVT
QTQIGLYAQD EITAGRWRGS FALRHDWSKQ EGTTYTNFAG EGEIDQSDKA LSGRAGLGYE
IAPGALVYAN YSTSFDPEIG VDGAGEQLEP TTGKQWELGV KYQPDSFNAL FTAAIYDLRQ
ENLTVNLGGA EGRRQVGEVK SSGLELGAVG ELAPGLNLRA SYAYNDTEQV DPSGANDGNE
MPNAPRHLAS LWLDKAFDNG VSLGGGLRYI GEREGDLANL YSLESVTLLD LAVGYSRENM
DASINLNNLS DEVYLANCGS FGCYYGEGRT ISAKISYKW
|
|---|
| |