| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1336 |
|---|
| Symbol | flgD |
|---|
| ID | 3720862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 3105119 |
|---|
| End bp | 3105787 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640072564 |
|---|
| Product | flagellar basal body rod modification protein |
|---|
| Protein accession | YP_354418 |
|---|
| Protein GI | 77464914 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.409063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCA CGGGCACGGA AACGAGCGCC GGCAGTTCGA CCACGCGGAG CAGGGGCGAA
GCCTCTGCCG ACAAGGCGGT CACGTCCGAC TACGAGACGT TCCTGCGGAT GCTGACCACG
CAGCTCCAGA ATCAGGATCC GATGAACCCC ATGGAGTCGG ACGATTTCGC CATGCAGCTC
GCGACCTTCT CGGGCGTGGA GCAGCAGGTG AAGACCAACG AGATCCTGAC CGGGATGGGG
GCCTCGATCG GGGTGATGGG CCTCTCCGAG CTGGCAGGCT GGATCGGGCG CGAGGCGGAG
GTCGAAGCCC CGGCCTGGTT CGACGGCGCG CCGCTCACCC TTTCGCCGAA ACCTTCCGAG
GATGCGGATC GGGCGGTGCT GGTCGTGCGG AATGCCGCGG GCGCGGTTGT GGCGCAGGAG
GACATCCCGA TCGGCGGAGG GCAGATGGAG TGGGCGGGCG CGGATTCCTC CGGGCAGCCG
CTGCCGAAGG GCGCCTACAG CTTCACGGTC GAGAGTTACT CGGGCGATCA GGTCACGGAC
ACGTCGAAGG TGGGCGTCTA CGCCGAGATC ATCGAGGCGC GCGGCGGCAG CAGCGGCACG
CTCCTCGTGA TGAAGGGGGG CATCGAGGTT CCCGCAAGCG CAGTCACTGC GCTGCGGGAC
GCCTCATAG
|
|---|
| Protein sequence | MNVTGTETSA GSSTTRSRGE ASADKAVTSD YETFLRMLTT QLQNQDPMNP MESDDFAMQL
ATFSGVEQQV KTNEILTGMG ASIGVMGLSE LAGWIGREAE VEAPAWFDGA PLTLSPKPSE
DADRAVLVVR NAAGAVVAQE DIPIGGGQME WAGADSSGQP LPKGAYSFTV ESYSGDQVTD
TSKVGVYAEI IEARGGSSGT LLVMKGGIEV PASAVTALRD AS
|
|---|
| |