| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1126 |
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| Symbol | rnr |
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| ID | 3720824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2889366 |
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| End bp | 2891624 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640072356 |
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| Product | RNAse R |
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| Protein accession | YP_354211 |
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| Protein GI | 77464707 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAGC TCCCTTCGAA AGCCCAGATC CTCGACTGGA TCGCCCAGAA TCCCTCCCTT
TCCGCGAAGC GCGACATCGT GCGTGCCTTC GGCATCAAGG GGAGTGCCGC GCGCATCGAA
CTGAAGCGCC TCCTGCGCGA GATGGAGGCC GAGGGCGCGC TGGAGAAACG CAAGCGGACC
TTCACGCCGC AGGGTGCCTT GCCGCCCGTG TCGGTGCTCG AGATCGTGGG GTCCGATGCG
CAGGGCGACC TGTTCGCGCG TCCGCTGGAA TGGGCGGGCG AGGGCGAGCC GCCGCGCATC
CTCTTCGTGG CCAAGAAGGG CGATCCGGCG CTGGCGCAGG GGGAGCGCAT CCTCGCACGG
CTGACCGAGG TCGAGGGCGA GGATGAGGGT CACACCCACG AGGCGCGCCT GATCCGGCGG
CTCGGCGGAT CGAAGCCGAA GATCCTCGGC ATCTTCCGCG CCAGCGACGA CGGCGGGCGG
ATCCTGCCCA TCGACAAGGG CGAGGACAAG GAATGGCGCG TGGCCCGCGA CGGGGCGGCC
GGGGCGCGCG ACGGCGAACT GGTCGAGGCC GAGCAGGCCG GGCCGCGCCG CCTCGGGCTG
CCGCTCGCGC GGATCACCGC GCGGCTGGGC GATCCGGCAG GCCCGCGCGC CGTGTCGCTG
ATCGCGATCC ACCAGCATGG CATTCCCGAC AGCTTCCCCG ATGCGGTGCT GGCGGAAGCC
GAGGCGGCGG GCCCTGCGCC CATGGCCGAA CGCGAGGATC TGCGGCATCT GCCCTTCGTC
ACCATCGATC CGGTCGATGC GCGCGACCGC GACGATGCGG TTCTGGCCGA GCCCGATCCC
GATCCGCAGA ACCCGGGCGG CCACATCCTC TGGGTGGCCA TCGCCGATGT GGCTCATTAT
GTGCGGCCCG GCTCGGCGCT CGACCGCGAG GCGCGGCGAC GGGGCAACTC CACCTATTTC
CCGGACCGCG TGGTGCCGAT GCTGCCCGAC GCGCTGTCGG GCGATCTCTG CTCGCTGCAT
CAGGAGGTGG ACCGGCCCTG CATGGCGGTG CGGATGCGGC TCTCGGCACA GGGCGAAAAA
CTTTCCCACC GCTTTACGCG TGGGATGATG CGCTCGCGCG CGAGCCTGAA CTACGCGCAG
GTGCAGAAGG CGCAGGACGG CGAGCCGGAC GAGACGACGG CGCCGCTGCT CGAGACGATC
ATCCGCCCGC TCTACGAGGC CTACGCGGCG CTCAAGCAGG CCCGCGCCCT GCGCCAGCCG
CTCGAACTCG ACCTGCCCGA GCGCAGGATC GAGCTTTCCG ACGAGGGGCG GGTCCTGTCG
GTGGCCTTCC GCGACCGGTT CGATGCCCAC CGGCTGATCG AGGAATTCAT GGTGCTGGCC
AATGTGGCCG CCGCCGAAGA GCTCGTGCGC CTGCGCCGGC CGCTGCTCTT CCGTGTCCAT
GAGGAGCCGT CGGCGGACAA GCTCGAGGCG CTGCGCGAGG TGGCCGAGGC CTCGGGCTTC
ACGCTGGCCA AGGGGCAGGT GCTGAAGACC GCGCATCTGA ACCGGCTGCT GGCGCAGGCC
CAGGGCACCG AGTTCGACGA GCTGATGAAC ATCACCACGC TGCGCTCGAT GACCCAGGCC
TATTACCATC CCGAGAACTT CGGCCATTTC GGGCTGGCCC TGCGCAGCTA CGCCCATTTC
ACCTCGCCGA TCCGGCGCTA CTCCGACCTG ATCGTGCATC GGGCGCTGAT CCTTGGGCAT
GGCTGGGGCG ACGACGGGCT GTCGGCGCAG GATATCGAGA TGCTCGAGGA GACGGCCAAG
CAGATTTCCG ATACCGAGCG GCGCAGCATG GCGGCCGAGC GCGACACGAC CGACCGCTAT
CTCGCCTCCT GGCTGTCGGA CCGGGTGGGG GCGGAGTTCA CCGGCCGGAT CTCGGGCGTG
CAGCGGTTCG GACTGTTCGT GAAGCTCGAC GAGAGCGGGG CCGACGGGCT GATCCCGATC
CGCTCGGTGG GCCGGGAATT CTTCCACTTC GATCCGGAAA GCCAGACGCT GATGGGGTCG
GACACCGGCC TCGTGCTGGG CATCGGCCAG CGGGTGACGG TGCGGCTGGC CGAGGCGGTG
CCGCTGACCG GCGGCCTCAT GCTGGAGCTG CTGACGGTCG AGGACCGCGG GCTGCCCGCG
CCGAAGCGCC GCCGGGGCCG GTCCGCGCCG CGCAAGCCGG GCCGGGAGGC GGCCAAGGCC
GGCAAGGTCA AGCGGCGGGT GTTGCGCACG CGCCGCTGA
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| Protein sequence | MDQLPSKAQI LDWIAQNPSL SAKRDIVRAF GIKGSAARIE LKRLLREMEA EGALEKRKRT
FTPQGALPPV SVLEIVGSDA QGDLFARPLE WAGEGEPPRI LFVAKKGDPA LAQGERILAR
LTEVEGEDEG HTHEARLIRR LGGSKPKILG IFRASDDGGR ILPIDKGEDK EWRVARDGAA
GARDGELVEA EQAGPRRLGL PLARITARLG DPAGPRAVSL IAIHQHGIPD SFPDAVLAEA
EAAGPAPMAE REDLRHLPFV TIDPVDARDR DDAVLAEPDP DPQNPGGHIL WVAIADVAHY
VRPGSALDRE ARRRGNSTYF PDRVVPMLPD ALSGDLCSLH QEVDRPCMAV RMRLSAQGEK
LSHRFTRGMM RSRASLNYAQ VQKAQDGEPD ETTAPLLETI IRPLYEAYAA LKQARALRQP
LELDLPERRI ELSDEGRVLS VAFRDRFDAH RLIEEFMVLA NVAAAEELVR LRRPLLFRVH
EEPSADKLEA LREVAEASGF TLAKGQVLKT AHLNRLLAQA QGTEFDELMN ITTLRSMTQA
YYHPENFGHF GLALRSYAHF TSPIRRYSDL IVHRALILGH GWGDDGLSAQ DIEMLEETAK
QISDTERRSM AAERDTTDRY LASWLSDRVG AEFTGRISGV QRFGLFVKLD ESGADGLIPI
RSVGREFFHF DPESQTLMGS DTGLVLGIGQ RVTVRLAEAV PLTGGLMLEL LTVEDRGLPA
PKRRRGRSAP RKPGREAAKA GKVKRRVLRT RR
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