| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1120 |
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| Symbol | |
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| ID | 3720704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2882283 |
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| End bp | 2883584 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640072351 |
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| Product | HlyD family protein secretion protein , membrane fusion protein |
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| Protein accession | YP_354206 |
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| Protein GI | 77464702 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.121585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGG CCGGCTCCTG GGACGACCCT GCTCCCCCGA GTTACCGCCC CATCTTTCAG
GCGGCGCTGG TCCTCATCCT GTCCCTCACC GTATCGTTGG GCAGCTGGGC GGTCTACGCC
CGGCTCGACG GTGCGGTCAT CACCCAGGGC GTCGTCCTGG CCGAAAGCCG CCGCAAGACC
GTCGAGAACC TCGAGGGCGG CCTCCTTGAG CGGCTTCTGG TGGCGCCGGG AGACAGGGTC
GCCGCCGGTC AGCCCGTAGC CCAGCTCGCC ACCGTCCAGG ACCGCGAGCG GCTGATCCAG
CTCGAGGCCG AGCGGGAGGG GCTGCTCTTC GACATCTGGC GCCTGCGGAC CGAAGCCGCC
GGCGCCAGGG TCCTCGATCC CGCCACGGCG CCGGGTCCCG ACGCCGAGCG GACGGCCGCG
CAGCTGCGGC TCTTTCAGAG CCGCCTCCAT GCGCACCGCG ACCGGATCGG ATCGCTCGAC
CGCCAGATCG AGCTTCTGAT CGCTCAGGGA GCGGCGAACG ATGCACAGGC GCGGGCTGCG
GATCTCCAGA TCGAAAGCTG GCGGGCGGAG CGGGCCGACC TCGTGACGCT GGTCGATCGG
GGCGCAAGTC CGCGCCAGAA ACTCGTCGAA CTCGATCGCA ACATCACGAC GCTGACGGGA
ACGCGCGAGC AATATCTGGC TCTTGCCCGG GCGGCGCGGG CCGATGTCGA GCGGGCCCGG
ATGGATCGCT CCACCGCCGG TCAGCTGCGT CTGGCCGAGG TGGCCGAGCA GCTCGCCGCT
GCCGGGAGGC AGCTTCCCGG GCTCGAGGCC CAGATCCGCG CCACGCGCGA CGTGCTCGAA
CGTCGAACGC TGCGGGCCCC ACAGGCGGGA CTGGTGGTCG AGGTACCCAC CGTGACGCCC
GGCGCCGTGA TCGGCTCCGG AACGGCCGTG ATGGAGATCG TGCCCGATCT CGATCACCTC
GTGATCCAGA TGCGCGTGCC GCCCGAGGCC ATCGACAACG TCCGCAAGGG CGGGCTGGCG
CGGGTGCGGC TGACGGCCTA TCGGCGCGCC CTGGCGCCGG TCGTCCGCGG GCAGGTCTCC
TTCGTCTCGC CGGATCTCAT CGAGGATCCG CGCGACGGCA CGACCTATTT CGAGGCTCGG
GTGACGCTCG ATCCCGAGTC GCTTGCCGAG CAGCCCGACT GGGTGCGGCT CAGCGCGGGA
ATGCCGGTCG AAGTGTCGGT CAGCACAGGC GAACGGCGGG CGGGGGATTA TCTGCTCGAG
CCGATCCTCC GCCACCTGCG CGGCGCCCTG CACGATCCCT GA
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| Protein sequence | MSAAGSWDDP APPSYRPIFQ AALVLILSLT VSLGSWAVYA RLDGAVITQG VVLAESRRKT
VENLEGGLLE RLLVAPGDRV AAGQPVAQLA TVQDRERLIQ LEAEREGLLF DIWRLRTEAA
GARVLDPATA PGPDAERTAA QLRLFQSRLH AHRDRIGSLD RQIELLIAQG AANDAQARAA
DLQIESWRAE RADLVTLVDR GASPRQKLVE LDRNITTLTG TREQYLALAR AARADVERAR
MDRSTAGQLR LAEVAEQLAA AGRQLPGLEA QIRATRDVLE RRTLRAPQAG LVVEVPTVTP
GAVIGSGTAV MEIVPDLDHL VIQMRVPPEA IDNVRKGGLA RVRLTAYRRA LAPVVRGQVS
FVSPDLIEDP RDGTTYFEAR VTLDPESLAE QPDWVRLSAG MPVEVSVSTG ERRAGDYLLE
PILRHLRGAL HDP
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