Gene RSP_1093 details

Gene Information

• Locus tag: RSP_1093
• Symbol: chrR
• ID: 3720852
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2850158
• End bp: 2850799
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640072325
• Product: anti-sigma factor ChrR
• Protein accession: YP_354180
• Protein GI: 77464676
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3806] Anti-sigma factor
• TIGRFAM ID: [TIGR02451] anti-sigma factor, putative, ChrR family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATCC GGCACCATGT TTCCGACGCC CTGCTGACCG CCTATGCGGC GGGCACGCTT 
TCCGAAGCCT TCTCTCTGGT GGTGGCCACG CACCTGTCGC TCTGCGACGA GTGCCGCGCC 
CGCGCCGGCG CGCTCGATGC GGTGGGGGGC AGCCTGATGG AGGAGACGGC GCCGGTCGCG 
CTCTCCGAGG GCAGCCTCGC CTCCGTCATG GCCCAGCTCG ACCGGCAGAT CCAGAGGCCA 
GCCCCGGCGC GCCGCGCCGA TCCGCGCGCG CCCGCGCCGC TGGCCGATTA TGTGGGCAGG 
CGGCTCGAGG ACGTCCGCTG GCGCACCCTC GGCGGCGGCG TGCGGCAGGC GATCCTGCCG 
ACGGGAGGAG AGGCCATCGC CCGGCTGCTC TGGATCCCCG GCGGGCAGGC GGTGCCGGAT 
CACGGCCACC GCGGGCTCGA GCTGACGCTC GTCCTGCAGG GCGCCTTCCG CGACGAGACC 
GACCGGTTCG GCGCCGGCGA TATCGAGATC GCGGATCAGG AGCTGGAACA TACGCCGGTG 
GCCGAGCGGG GCCTCGACTG CATCTGCCTC GCCGCCACCG ATGCGCCGCT GCGCTTCAAC 
AGCTTCCTAC CGAAGCTGGT GCAGCCCTTC TTCCGCATCT GA 

 

Protein sequence

MTIRHHVSDA LLTAYAAGTL SEAFSLVVAT HLSLCDECRA RAGALDAVGG SLMEETAPVA 
LSEGSLASVM AQLDRQIQRP APARRADPRA PAPLADYVGR RLEDVRWRTL GGGVRQAILP 
TGGEAIARLL WIPGGQAVPD HGHRGLELTL VLQGAFRDET DRFGAGDIEI ADQELEHTPV 
AERGLDCICL AATDAPLRFN SFLPKLVQPF FRI