Gene RSP_0824 details

Gene Information

• Locus tag: RSP_0824
• Symbol: pth
• ID: 3718365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: -
• Start bp: 2570458
• End bp: 2571135
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640072046
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_353905
• Protein GI: 77464401
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.705778
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGT TCGTCGGTCT CGGCAATCCC GGTGCGCGCT ATGCGGGCAA CCGGCACAAC 
ATCGGCTACA TGGCGGTGGA GGCCATTGCC GCGGACCATG GGTTCGGCCC GTGGCGCGCG 
CGCTTTCAGG GGCTGACCTC GGAGGGGCGG CTCGGGTCTG AGCAGGTGCT GCTCCTCAAG 
CCCGAGACCT TCATGAACCT CTCGGGCCAG TCGGTGGGCG AGGCCATGCG CTTCTACAAG 
CTGACCCCCG CCGACGTGAT CGTGTTCCAC GACGAGCTCG ACCTTGCGCC GGGCAAGCTG 
CGGCTGAAGC AGGGCGGGGG CCATGCGGGC CACAACGGGC TGCGCTCGAT CCACGCCCAT 
GTCGGCGAGG CCTACGGGCG GGTGCGGCTG GGGATCGGCC ATCCGGGGCA CAAGGATGCG 
GTGGCGCCCT ATGTGCTGAG CGATTTCGCC AAGGCGGATC AGGACTGGCT GGCGGATCTC 
CTGCGCGGGA TCTCGGACGG GGCCGAGGCG CTGGCGCGGG GCGACGGGGC GAAGTTCCAG 
AATGCAGTGG CGCTCCGGAT GCAGCCGCCG AAGCCCGAGA AGCCGAAGCC TGCCGCGAAG 
GCACCCGAGG CCCAGGCGCC CGAGGCCGCG CCGGACGAAC GCAGCGCGCT TCAGAAGCTG 
GCCGACCGGT TCCGCTAG 

 

Protein sequence

MKLFVGLGNP GARYAGNRHN IGYMAVEAIA ADHGFGPWRA RFQGLTSEGR LGSEQVLLLK 
PETFMNLSGQ SVGEAMRFYK LTPADVIVFH DELDLAPGKL RLKQGGGHAG HNGLRSIHAH 
VGEAYGRVRL GIGHPGHKDA VAPYVLSDFA KADQDWLADL LRGISDGAEA LARGDGAKFQ 
NAVALRMQPP KPEKPKPAAK APEAQAPEAA PDERSALQKL ADRFR