Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0529 |
Symbol | nifV |
ID | 3718442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2266463 |
End bp | 2267539 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640071738 |
Product | homocitrate synthase |
Protein accession | YP_353602 |
Protein GI | 77464098 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGCC AGCAGCCGCG GGCGAGCTTC CTGCCCGAAA GCCCGCTCGC CCCCGTGGCC CTCTGCGACA CGACGCTGCG CGACGGAGAG CAGACGGCGG GCGTGGCCTT CACCCGCGCC GAGAAGCGGG CCATCGCCGA GGCGCTGCAG GCCGCAGGCG TGGCCGAGGT CGAGGTGGGC GTGCCCGCCA TGGGCGAGGA AGAGCGGGCC GACATCCGCG CGGTGGCGGC GGTGCTGAAG ACGGCGGCGC CCGTCGTCTG GTGCCGCCTG CGCGCCGAGG ATCTGGCGGC CGCGCAGCGC ACGGGCGTCG TGCGGCTCCA TATCGGCGTC CCCGTCTCCG AGCGCCAGAT CAGTGCCAAG CTCGGCAAGG ACGCGGCCTG GGTGCGCGAC AAGGTCGAGA AGCTCGTGCG CGCCGCTTCC TGGGCCGGTC ACAAGGTGTC GGTGGGGGCC GAGGATGCCT CGCGCGCCGA TCCGTTCTTT CTGGCCGAGA TCGCCCATGT CGCGGCCGAG GCGGGCGCGA TCCGCTTCCG CATCTCGGAC ACGCTGGGCG TGCTCGACCC GTTCGCTGCG CACGAACTGG TGGGCCGCGT CGTCACGCGC TGCCCGCTGC CGGTGGAGTT CCACGGCCAC AACGATCTGG GCATGGCCAC GGCCAACAGC CTCGCCGCCG CGCGCGCCGG GGCCTCGCAC CTGTCGGTCA CGGTGAACGG GCTGGGCGAG CGGGCGGGCA ATGCCGCGCT CGAGGAGGTG GCGGCCGCGC TCGAAGCGGC GGGCCGCGCC ACCGGCGTCG CGCTGGGCCA GCTCTGCGCC CTCTCGGAGC TGGTGGCCCG CGCCTCGGGA CGGCCGCTCT CGCCGCAGAA GCCCATCGTG GGCGAGGGGG TCTTCACCCA TGAATGCGGC ATCCATGTCG ACGGGCTGAT GAAGGACCGC GCCACCTACG AGAGCGCGGA CCTGCGCCCC GAGCGGTTCG CCGCAGCCAC CGCATCGCCA TCGGCAAGCA TTCCTCGGCC GCCGGGCTCG CCCGGGCGCT GGCCGAGGCG GGGCTTCCCG CCGACGCGGC GACGCTCGCG GCCCTGA
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Protein sequence | MSRQQPRASF LPESPLAPVA LCDTTLRDGE QTAGVAFTRA EKRAIAEALQ AAGVAEVEVG VPAMGEEERA DIRAVAAVLK TAAPVVWCRL RAEDLAAAQR TGVVRLHIGV PVSERQISAK LGKDAAWVRD KVEKLVRAAS WAGHKVSVGA EDASRADPFF LAEIAHVAAE AGAIRFRISD TLGVLDPFAA HELVGRVVTR CPLPVEFHGH NDLGMATANS LAAARAGASH LSVTVNGLGE RAGNAALEEV AAALEAAGRA TGVALGQLCA LSELVARASG RPLSPQKPIV GEGVFTHECG IHVDGLMKDR ATYESADLRP ERFAAATASP SASIPRPPGS PGRWPRRGFP PTRRRSRP
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