| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0413 |
|---|
| Symbol | |
|---|
| ID | 3718828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2148157 |
|---|
| End bp | 2149542 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640071626 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_353490 |
|---|
| Protein GI | 77463986 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGCA AGGTCTTAAT CACCGACAAT GTGGCCACGA ACCGCATCGT CCTCAAGGTC
AAGCTCGCGG CGGCCTGTTA CCTGCCCCTG ATGGCGGGCG ACGGGGCCAG CTGCCTGTCG
CTGGCGCGCG GGGAACTGCC CGATCTGATC CTGCTCGACT GGGCGCTGCC GGACGTGCCG
GGCCTCGAGG TGCTGCGGCA CCTGCGCGCG GATCCGGCGA CACGCGACAT TCCCGTCATC
ATGATCTCGG CCTCGCGCGA TCCGGCGATC CGGCTGCAGG CGCTGGCCGA GGGGGCCGAC
GACTTTCTCG CCAAGCCTCT GGACGATCCG GTGCTGATGG CGCGGCTGCG CAGCCTCCTG
CGGCTGCGCG ACAGTTCGGG CGAGGGCGCG GTGCGCGGGG CCGCGCTCCG CGCGCTGGGT
CTGGCGGAAC GGGCGGAGTC CTTCGAGGGG CCGGGCCTGA TCGCGCTCGT GGCGGCACGG
CCCGAGACGG GCCTGCGCTG GCGGAAGGAG CTTCAGGCGC TGATGCCCGA CCGGATCGTG
CTTCAGACCC GCGAGGAGGC GCTGGCCGAG GCCGGTCCGG TGCCCGACAT CTTCGTGATC
GATGCCGATC TCGACGGGCC GGGCGGCGGG CTCAGGCTCA TGTCCGACCT CCGCAGCCGG
GCCGGCTCGC GCCATGCCGC GGTCTGCATC GTCCGCGGAC AGATGGGCGG CGAGGGTGCG
GCGATGATCT ACGATCTCGG CGCGAACGAC CTCCTGCCCG CGGCCTTCGA TCCGCGCGAG
GCGCGGCTCC GGCTGCGCAA CCTCCTGCGC CGCAAGCGCC GGGGCGACGA GATGCGCGCC
ACGCTGCAGA ACGGGCTCCG GCTTGCGGTC GTGGATCCCC TGACCGGGCT CTACAACCGC
CGCTATGCGG GCGCCCATCT CGCCGCCGTG GCCGAACGGG CGCGCGCGGC GGACGAGCGG
TTCGCGGTGA TGGTGATCGA TCTCGACCGG TTCAAGTCGG TGAACGACCG CTGGGGGCAC
GGCGCGGGCG ATGCGGTGCT CGTGGCCGTG GCGCGGCGGC TGCATGCCAA CCTCCGCCCC
GGCGACCTGA TCGCGCGCAT CGGCGGCGAG GAGTTCCTCG TGGCGCTGCC CGACGTGCCC
CGCCCGGAGG ATGCCCATGC GGTGGCCGAG CGGCTGCGCG AGGCGGTCGA GGAGGAGCCG
GTGCCCCTGC CCGGCGGCGG CAGCCTGCGG GTGACGATCT CGGTGGGCCT TGCCCTCTCG
CCCGACGAGG CCGGACGGCG CGCGGAGCCG GTCGATGCGG TGGTGCAGCG GGCCGACAGC
GCGCTCCTCC TCGCCAAGTC GGCGGGCCGG AACCAGGTCA CGATCGAGCG GAGCGCCGTG
GCCTGA
|
|---|
| Protein sequence | MGGKVLITDN VATNRIVLKV KLAAACYLPL MAGDGASCLS LARGELPDLI LLDWALPDVP
GLEVLRHLRA DPATRDIPVI MISASRDPAI RLQALAEGAD DFLAKPLDDP VLMARLRSLL
RLRDSSGEGA VRGAALRALG LAERAESFEG PGLIALVAAR PETGLRWRKE LQALMPDRIV
LQTREEALAE AGPVPDIFVI DADLDGPGGG LRLMSDLRSR AGSRHAAVCI VRGQMGGEGA
AMIYDLGAND LLPAAFDPRE ARLRLRNLLR RKRRGDEMRA TLQNGLRLAV VDPLTGLYNR
RYAGAHLAAV AERARAADER FAVMVIDLDR FKSVNDRWGH GAGDAVLVAV ARRLHANLRP
GDLIARIGGE EFLVALPDVP RPEDAHAVAE RLREAVEEEP VPLPGGGSLR VTISVGLALS
PDEAGRRAEP VDAVVQRADS ALLLAKSAGR NQVTIERSAV A
|
|---|
| |