| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0361 |
|---|
| Symbol | sda |
|---|
| ID | 3718984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2091503 |
|---|
| End bp | 2092882 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640071571 |
|---|
| Product | L-serine ammonia-lyase |
|---|
| Protein accession | YP_353436 |
|---|
| Protein GI | 77463932 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.739457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTGT CCGTCTTCGA CATCTTCAAG GTGGGCGTCG GCCCCTCCTC GTCGCACACG
ATGGGACCGA TGGTGGCCGC GGGCCGCTTC CTCGACCGGC TCCGGGCAAG CCCGTTCCAT
GCGCACGGGC TGCGGGCCTC GCTGCACGGC AGCCTCGCCT TCACCGGCGT GGGCCATGCG
ACCGACCGGG CGACGATCCT GGGCCTCGCG GGGTTCGAGC CCGGCAGCTA CGATGCGGAG
CGCGCCGAGG AGGTGCTGGC CGCGATCCGC GCCACCGGCC GGATCGAGGC GCCGGGCCTC
GGGCCGCTCC AGTTCGACCC CGAGAAGGAT CTGGTCTTCG ACTACGGTCA TGCCCTGCCG
GGCCATGCCA ACGGGATGCG CATTCAGGCG ACCGACGCAC AGGGCGACGT GCTGCTGTCG
GAGGTCTATT ATTCCGTGGG CGGTGGCTTC GTCCTGACCG AGGCAGAGCT TGCGGAATCG
AAATCCGACC GCCCCGCCGC CGGTCCCGCC GTCCCCTTCC CCTTCGAGAG TGCGCACCAG
ATGCTCGGGA TGGCCGAGGC CTCGGGCCTG TCCATCGCGG CGATGAAGCG CGCCAACGAA
CTCGCGGTCC GCAGCGCGCC CGAGCTCGAC CGCGGGCTGA AGCGGATCTG GCAGGTGATG
AACGACTGCA TCGAGCGCGG CATGGAGACC GGCGGCACGC TGCCGGGCGG CCTGCATGTC
CGCCGCCGCG CCAAGGGCAT CCGCGAGGCG CTGCTGGCCG AACGCGGGCT GAACATGACC
GCGCCGCACA CGATCAACGA CTGGATGAGC CTCTATGCCA TGGCGGTGAA CGAGGAGAAT
GCCGCCGGCG GTCAGGTGGT CACAGCCCCG ACCAACGGCG CGGCGGGCGT GGTGCCCGCC
GTCATCCGCT ACTGGCTCGA TCATGTTCCG GGGGCGAGCC CCGCGAAGCT CGGGGATTTC
CTCCTGACGG CCGCGGCCAT CGGCGGGCTC GTCAAGCACA ATGCCTCGAT CTCGGGGGCC
GAATGCGGCT GTCAGGCCGA GGTGGGCTCG GCGGCGGCGA TGGGCGCGGC GGGGCTTGCG
GCGGTGCTCG GCGGCACGCC CGCTCAGGTC GAGAATGCGG CCGAGATCGC GCTGGAGCAT
CACCTCGGCA TGACCTGCGA CCCCGTGCGC GGCCTCGTGC AGGTGCCCTG CATCGAGCGC
AACGGGCTCG GCGCGATCAA GGCCGTGTCG GCGGCGAGCC TCGCGCTCCG CGGCGACGGC
GAGCATCTGG TGAGCCTCGA CGTCTGTATC GAGACGATGC GCCAGACCGG CCGCGACATG
AACGACAAAT ACAAGGAGAC CTCGCTCGGC GGCCTCGCGG TGAATGTCCC GAACTGCTGA
|
|---|
| Protein sequence | MFLSVFDIFK VGVGPSSSHT MGPMVAAGRF LDRLRASPFH AHGLRASLHG SLAFTGVGHA
TDRATILGLA GFEPGSYDAE RAEEVLAAIR ATGRIEAPGL GPLQFDPEKD LVFDYGHALP
GHANGMRIQA TDAQGDVLLS EVYYSVGGGF VLTEAELAES KSDRPAAGPA VPFPFESAHQ
MLGMAEASGL SIAAMKRANE LAVRSAPELD RGLKRIWQVM NDCIERGMET GGTLPGGLHV
RRRAKGIREA LLAERGLNMT APHTINDWMS LYAMAVNEEN AAGGQVVTAP TNGAAGVVPA
VIRYWLDHVP GASPAKLGDF LLTAAAIGGL VKHNASISGA ECGCQAEVGS AAAMGAAGLA
AVLGGTPAQV ENAAEIALEH HLGMTCDPVR GLVQVPCIER NGLGAIKAVS AASLALRGDG
EHLVSLDVCI ETMRQTGRDM NDKYKETSLG GLAVNVPNC
|
|---|
| |