| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0246 |
|---|
| Symbol | |
|---|
| ID | 3719388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1969599 |
|---|
| End bp | 1971371 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640071454 |
|---|
| Product | ABC lipid efflux transporter, fused ATPase and inner membrane subunits |
|---|
| Protein accession | YP_353319 |
|---|
| Protein GI | 77463815 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCCGCA CACCCGCCGA TCCGCGCTAC AGCTCCGGCC GCCTGTTCGG CCGGCTCTGG
CACGGCTATC TCAAGCGCCA CACGGGCACG ATGGGCTTGG CCTTCCTGCT CAACGTGATC
GAGGGCTCGA CGCTCGGCGC GCTCTCCTGG CTGATCCAGC CGCTCTTCGA CCGCGTCTTC
GCCCCGGGCG GCAACAACCT GCTGCCGTGG GTGGGCCTGG CGATCCTCGG CCTCTTCGTG
CTGCGCGCGA TCACCTCGGT GGCCTCCAAG GCCATTCTCA CGCGGGTCTC GCAGATCAGC
TCGACCGCGA TGCAGGTCGA TCTGCTCCGC CACATCCTGA CCCTCGATCA GGGCTTCTTC
CAGAAGAACC CGCCCGGCGC GCTGATGGAG CGGGTGCAGG GCGACACGAA CGCCGTGCAG
GGCGTCTGGT CGAGCGTGAT CCTCGGCATG GGGCGCGACG TGGTCTCGCT GATCGGCCTC
TTTGCCGTGG CGGTTTCCAT CGATCCGATC TGGACACTGG CCGCGCTGGT GGGGGCGCCG
CTCCTGATCC TGCCTGCGCT GGTCGTGCAG CGCTATATCC GCAAGAAGAC GCGCCAGATG
CGGGTGCAGG CCGGGGCGCG CTCCACCCGG CTCGACGAGA TCTTCCATGG CATCCAGCCG
ATCAAGCTGA ACCGGATGGA GACCTACCAG CTCGACCGGT TCCGGCGGAT CGTCGATGTG
ATCGTGCGGG GCCAGCTCAA GATGGCGGTG GGGCGCGCCA CCATGCCCGC GCTGATCGAC
GTCATCACCG GGATCGGCTT CTTCGCCGTC CTCGTCCTCG GCGGGCGCGA GATCGCCTCG
GGCGAGCGGA CGACGGGCGA GTTCATGTCC TTCTTCACCG CCATGGCCCT CACCTTCCAG
CCGCTCCGGC GTCTGGGCGA CCTGTCGGGC TTCTGGCAGA TCGCGGCCGC CAGCCTCGAG
CGGATCTACC GGCTCTTCGA CACCGAACCC CAGGTGCTGC GCCGCCCGGT CACGGCCACG
CCTAAGGCAG GCGTTCCCGA GATCCTGATC GAGGACGTGC ATTTCGCCTA CGACGACCAT
CCCGTGCTGA ACGGCCTCAG CTTCCGGGCC GCGCCGGGCA GGATGACCGC CCTCGTGGGG
CCGTCGGGCG CAGGCAAGAG CACGGTCTTC CATCTGCTCA CGGGCCTCAT CGAGCCAAGG
TCGGGGCGCG TGCTCCTCAA CGGGGTCGAC GCGGCAGACA TGGCCCTGTC GGACCTGCGG
GCGCAGTTTG CCGTCGTTTC GCAGGAGGCG GGCCTCTTCG ACGAGACGAT CCGCGAAAAC
GTGACCCTCG GCCGCGACGT GCCGCAGGAC CGGCTCCGGG CGGCGCTCGA GGCCGCGCAT
GTGACGGAGT TCGTCGACGG CCTGCCCGAG GGCGATCTGA CGCCCGCGGG GCCGCGCGGC
TCGCGTCTGT CGGGCGGCCA GCGCCAAAGG GTGGCCATCG CGCGAGCGCT CGTCTCGGAG
GCGCCGGTAC TGCTTCTCGA CGAGGCCACC TCGGCGCTCG ACGCGGCCTC CGAGGCGCTG
GTGGCCGAGG CGCTGAGCCG GCTTGGCGAG GGCCGCACGA CGCTGGTCAT CGCCCACCGG
CTCTCGACCG TGCGGCAGGC CGACCGGATC GTGGTCATGG AAGAGGGCCG CGTCGTCGAT
CAGGGCACGC ACGAGGAATT GCTGGCGCGG GGCGGTCTCT ATGCCGAACT GCACCGGCTG
CAGTTCAGGA ACGGAGAGAC CCATGCCGGG TGA
|
|---|
| Protein sequence | MPRTPADPRY SSGRLFGRLW HGYLKRHTGT MGLAFLLNVI EGSTLGALSW LIQPLFDRVF
APGGNNLLPW VGLAILGLFV LRAITSVASK AILTRVSQIS STAMQVDLLR HILTLDQGFF
QKNPPGALME RVQGDTNAVQ GVWSSVILGM GRDVVSLIGL FAVAVSIDPI WTLAALVGAP
LLILPALVVQ RYIRKKTRQM RVQAGARSTR LDEIFHGIQP IKLNRMETYQ LDRFRRIVDV
IVRGQLKMAV GRATMPALID VITGIGFFAV LVLGGREIAS GERTTGEFMS FFTAMALTFQ
PLRRLGDLSG FWQIAAASLE RIYRLFDTEP QVLRRPVTAT PKAGVPEILI EDVHFAYDDH
PVLNGLSFRA APGRMTALVG PSGAGKSTVF HLLTGLIEPR SGRVLLNGVD AADMALSDLR
AQFAVVSQEA GLFDETIREN VTLGRDVPQD RLRAALEAAH VTEFVDGLPE GDLTPAGPRG
SRLSGGQRQR VAIARALVSE APVLLLDEAT SALDAASEAL VAEALSRLGE GRTTLVIAHR
LSTVRQADRI VVMEEGRVVD QGTHEELLAR GGLYAELHRL QFRNGETHAG
|
|---|
| |