Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5722 |
Symbol | |
ID | 3714217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6411722 |
End bp | 6413431 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351446 |
Protein GI | 77461939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.606604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGAGA GGTCGGAAAT GGAGCATAAG TTTCATTTCT TTCCCGAGCC ATTTCCAGAT GAAACGCTGC ATAGCGTTCT GTCTAGATAT GTTCGTCTCT CTGGTTTTTG CGGGGTCGCT AAGGTGGTCG CACTCCCCCC ATGGAAGGGG AGCTTTTCGG ATAATGTGCC TTTCCCTTGT CGACTCAATG AACTCGAACA AGCACTGCCG CATGGGACTG GGCTAGCAGT GGCGCGCATG ATCGAGGAGC ATACGCTGCT GCCGTATTAC CAGCCGTTCC TCTCTGAAAT CCAACTTCAC CAAGCAAGAT ATCAAATGGA GTTTGGTAAC GGCGCTGGTC TGAAGTTGAG CATGGGGTTG ATTGCCAGCA GGTTGGAACA TGCGTCATGT GCCCGGTTCT GTTCCAAGTG CATCGCTCAT GACCAAGCCC AATTGGGAGC GGCTTATTGG CATCGAGTTC ATCAGTTACC GGGCGTCTAT GTGTGCCCGG TTCACGAGGT GCCGCTCAGG GTTGTTGAGC ATCGTGTTTT CAGCCAATTC AGAAGACGGC TGATGCTGCC CGATGATGAA GCCGTCCGTT TATGTGCCTA TTTGCTTGAA ATACCCTCGA AAAAACGTTC TACGCTGCTC GACCTCGCCA GATGTTCAAA TAGTTTGCTT CAGGCTTTGG CCCCGCCTCT TGACCCGATC CATATTCGCA GTTCACTGCT AAGAGCTGCG GCTGATTCAG GCATCGCCGG CTCCACCCAT CGATTGCGGT TGAGCCACTT GGCCAGCTTC ATGAAGAGCC ATTTGGACCT GTTGCCTGAC TACGGTGAGT ACCAAATCCT TGCAGAGCAT TCTCAGGGTT CTGCTCCTAC TTGGGTGACC AAGCTCCTCA GAAAGCCCAG ACATTCCCAT CACCCGCTGA AGTACATTGT TCTCACAAAC GCTCTCGGTA TTGATATCCG CGATTTACTG ATCGATGGCC TCAGGCCGTC AGTTGTCTCA ACTCAGGCGG AATCAATTGG CGGCCAATCG CCGATGCTGG TGACGGGCGT TTGCAGCGAT CTGCCCGTCC ATGCGCACCC TGTTGTGGGA AAACTCTCTG GATTGCGGCG GCTGATTTGG AAGGATGCCC AGAGAGGTAT GAGTGCATGC GAAATTGCTG GTAAGCGTGG CGTCTCCCTT GCCACCACCT ATCGAACGAT TCGTGCGAAT CCCGATGGGC CTGAGCGCTG GAAAGATTCT AGGTTCAAGA GAGAGCTGGA GCTTCGTCGG GAGCGACTTA GCCGCCAATA TAAGGACCGT TTCGCTCATG ACTGCGCTGA CTATGAGTGG CTGTATAGAA ATGACCGCGC TTGGCTTACC GAGCAATGCA ATTCGAGCGG CTCGCGAAGA TTGGGCCGCA AGCCAAGCTC TGTATTCGTT GACCTCGATC CATCCTTGGC TGCTGAGATT CACAACTGCG CGAGCAGACT CTTCTCCTCT CCCACTAAGC CGGTGTGGGT GAATCGATCA AGGATAGGTC GGGAGTTGGG CGCTGTGGCG AGATTTGAAA AGCAATTGGG TAAGTTACCG ATGTGCGCTG TGGCGCTGGA TCAGGTTTGT GAGAGTCGCC AGCAATTTCA CTGTCGTCGC CTTGCTTGGG CGAAGCAACA ACTGCTGCTG GATGGTGTGC GGGTCACCAA ATCTCGGCTT TACAGGCTGG CAAGCATCCG AATGGGGTAG
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Protein sequence | MTERSEMEHK FHFFPEPFPD ETLHSVLSRY VRLSGFCGVA KVVALPPWKG SFSDNVPFPC RLNELEQALP HGTGLAVARM IEEHTLLPYY QPFLSEIQLH QARYQMEFGN GAGLKLSMGL IASRLEHASC ARFCSKCIAH DQAQLGAAYW HRVHQLPGVY VCPVHEVPLR VVEHRVFSQF RRRLMLPDDE AVRLCAYLLE IPSKKRSTLL DLARCSNSLL QALAPPLDPI HIRSSLLRAA ADSGIAGSTH RLRLSHLASF MKSHLDLLPD YGEYQILAEH SQGSAPTWVT KLLRKPRHSH HPLKYIVLTN ALGIDIRDLL IDGLRPSVVS TQAESIGGQS PMLVTGVCSD LPVHAHPVVG KLSGLRRLIW KDAQRGMSAC EIAGKRGVSL ATTYRTIRAN PDGPERWKDS RFKRELELRR ERLSRQYKDR FAHDCADYEW LYRNDRAWLT EQCNSSGSRR LGRKPSSVFV DLDPSLAAEI HNCASRLFSS PTKPVWVNRS RIGRELGAVA RFEKQLGKLP MCAVALDQVC ESRQQFHCRR LAWAKQQLLL DGVRVTKSRL YRLASIRMG
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