Gene Pfl01_5688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5688 
Symbol 
ID3713680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6374031 
End bp6375161 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content58% 
IMG OID 
Productglycosyl transferase, group 1 
Protein accessionYP_351415 
Protein GI77461908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.285621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.595328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTC TTCATTTCTT CAAGACGTAC CTGCCTGACT CGGTCGGCGG TATCGAACAA 
GTCATCTTTC AACTCTGCGA GAGTGGCGCC CAACACGGTA TCGAAGGCCA GGTGCTGACT
CTCAGCGCCA ATCCAGAGCC TGCGATGGTG CGCCTCGGCC AGCACGAGGT GCATCGGGCA
AAACTGGATA TCCAGTTCGC CTCCACCGGT TTTTCCTGGA GCGTGTTCAA ACAGTTTCGC
GAACTGGCCG CCGAAGCCGA CGTGATCAAC TACCACTTCC CGTGGCCGTT CATGGATCTG
GTGCATTTCG CCAGCGGCGT AAACAAACCG ACGGTGGTGA CGTATCACTC GGACATCATT
CGCCAGAAGC ACCTGCTCAA ACTCTATCGC CCGCTGATGA ACCGTTTTCT CGCCAGTGCC
GACCGGATTG TCGCGGCCTC GCCAAACTAT CTGCACACCA GCGATGTGTT GCAGCAGTTC
CAGGACAAGA CCCGGGTCAT TCCCTACGGT TTGAACAAGG CCGGTTATCC ACAGCCCGAC
GTCGAACGCA TGAACCGTTG GCGGCAGCAG CTTGGGGATA AGTTTTTCCT GTTTGTCGGG
GTGATGCGTT ATTACAAAGG CCTGCACATC CTGCTCGATG CCTTGAAAGA CGTCGATTAC
CCGGTGGTGA TCGTCGGCGC CGGCCCGCTG GAGCAGGAAC TGCACGCCCA GGCCGCCGCG
CTGGGCCTGC GCAACCTTCA TTTCCTCGGT CGTCTGAGCG ATGAAGACAA GGTCGCCCTG
CTGCAACTGA GCTACGCCAT CGTCTTCCCG TCGCACCTGC GCTCGGAAGC ATTCGGCATT
TCGCTGCTCG AAGGCGCGAT GTACGGCAAA CCGATGATCT CCAGCGAGAT CGGCACCGGC
ACCAGCTTCA TCAATATCCA CAATGAAACC GGATTGGTGG TGCCACCGAG TCATCCACAG
GCGTTTCGCG AATCGATGCG CACCCTGTGG GAAGACCCGG CCCTCGCTGC CGAAATGGGC
CTCAAGGCCG AGGCCCGCTA TCGGCAGTTA TTCACAGCCG ATGAAATGGG CCGCAAATGG
ACCGAGCTGT ATCAGGAGCT GCTGGAGGAA AAGGCGTTGT CCTACGCCTG A
 
Protein sequence
MRVLHFFKTY LPDSVGGIEQ VIFQLCESGA QHGIEGQVLT LSANPEPAMV RLGQHEVHRA 
KLDIQFASTG FSWSVFKQFR ELAAEADVIN YHFPWPFMDL VHFASGVNKP TVVTYHSDII
RQKHLLKLYR PLMNRFLASA DRIVAASPNY LHTSDVLQQF QDKTRVIPYG LNKAGYPQPD
VERMNRWRQQ LGDKFFLFVG VMRYYKGLHI LLDALKDVDY PVVIVGAGPL EQELHAQAAA
LGLRNLHFLG RLSDEDKVAL LQLSYAIVFP SHLRSEAFGI SLLEGAMYGK PMISSEIGTG
TSFINIHNET GLVVPPSHPQ AFRESMRTLW EDPALAAEMG LKAEARYRQL FTADEMGRKW
TELYQELLEE KALSYA