Gene Pfl01_5682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5682 
Symbol 
ID3713674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6367087 
End bp6368058 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_351409 
Protein GI77461902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.61306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA GTGCATTGAT CACCGGGATC ACCGGCCAGG ACGGCGCGTA TCTGGCCAAG 
CTGTTGCTCG ACAAGGGTTA CAAGGTTCAC GGCCTCGTGG CACGGCGCAG CAGCGACTCG
CGCTGGCGTC TGCGCGAGAT GGGCGTTGAA GCCGACATCG TTTACCTGGA CGGCGACATG
GCCGACGCCT GCTCGGTGCA GCGCGCGGTG ATCAAGTCGG CGCCGGACGA GGTGTATAAC
CTGGCGGCCC AGAGCTTCGT TGCCGCCTCC TGGGACCAAC CGGTAACCAC CGGCATCGTC
GATGGCCTGG GCGTGACTCA CCTGCTCGAA GCGATCCGTC AGTTCAGCCC GCACACGCGT
TTCTATCAGG CGTCCACCAG CGAAATGTTC GGTCTGATCC AGGCCGAGCA ACAGGATGAG
AACACCCCGT TCTACCCGCG CAGCCCGTAC GGCGTGGCCA AACTCTATGG CCACTGGATC
ACCGTCAACT ACCGTGAAAG CTTCAACCTG CACGCCAGCA GCGGCATTTT GTTCAATCAT
GAATCACCCC TGCGCGGCAT CGAATTCGTG ACCCGCAAGG TCACCGATGC CGCCGCCCGG
ATCAAACAGG GCAAACAGCA GGAGCTGGCC CTGGGCAACA TCGATGCCAA GCGCGACTGG
GGCTTCGCCG GTGACTACGT CGAGGCCATG TGGCTGATGC TGCAACAGGA CAAGCCCGAC
GATTTCGTGG TCGCCACCGG CGTCACCACC ACCGTGCGCG AGATGTGTCG CATCGCCTTC
GATCACGTCG GCCTCAACTA TCGGGATTAC GTGAAGATCG ACCCGGCGTT TTTCCGCCCG
GCCGAAGTCG AAGTGCTGCT CGGCAATCCG GCCAAGGCCC AGCGCGTGCT GGGCTGGAAA
CCGAAAACCG ACCTCGACAC CCTGATCCGC ATGATGATGG ATGCGGACAT GAAACGCGTC
GCCAAGGAGT AG
 
Protein sequence
MTKSALITGI TGQDGAYLAK LLLDKGYKVH GLVARRSSDS RWRLREMGVE ADIVYLDGDM 
ADACSVQRAV IKSAPDEVYN LAAQSFVAAS WDQPVTTGIV DGLGVTHLLE AIRQFSPHTR
FYQASTSEMF GLIQAEQQDE NTPFYPRSPY GVAKLYGHWI TVNYRESFNL HASSGILFNH
ESPLRGIEFV TRKVTDAAAR IKQGKQQELA LGNIDAKRDW GFAGDYVEAM WLMLQQDKPD
DFVVATGVTT TVREMCRIAF DHVGLNYRDY VKIDPAFFRP AEVEVLLGNP AKAQRVLGWK
PKTDLDTLIR MMMDADMKRV AKE