Gene Pfl01_5557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5557 
Symbol 
ID3713123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6224260 
End bp6225006 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID 
ProductTonB-like 
Protein accessionYP_351285 
Protein GI77461778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA CGCGCCATAA GCTGACGCGT TACAGCGGTA GCCTGGCCGT GGTGCTGGGT 
GTTCACGCGC TGGCCATCGC GCTGGCGCTG AACTGGACCG CCCGCCCGCC CATCGAATTG
CCGCCGCAGG CAATGATGGT CGAGCTGGCA CCGGTTCCGG CCCCGCCACC GCCCGCACCG
CCGAAAGTCG TCACGCCACC GCAGCCACCG GCTCCGGTTG AAGAACTGCC GATCCCGAAA
CTGGCTGAAG CGCCAAAAGC CGAGATCGCG GTGCAGAAAC CGAAGCCCAA GCCGAAACCA
AAACCGCCGA AGCCGATCGA GAAGAAACTG CCCGATCCGC CGAAGGAGAA ACCGTCCGAA
GAGAAGCCCG CCGATACCCA GCCGACTCAG GCCCCGACGG AGAAATCCGC CCAGCCTGCA
CCGGGCCCGT CGCCTGCACA AATGGCCGCC AAGGCCAGCT GGCAAGGCAC CCTGCTCGCG
CACCTGGCCA AGTACAAGAA GTACCCGGCC AGTGCTCAGG CACGGGGCAA GGAAGGCTTG
AACCGGTTGC GTTTCGTGGT CGATGGCGAA GGCAACGTGC TGTCGTTCGA ACTGGTGGGG
CGCTCCGGCA ACGCCGATCT GGACCGGGCC ACCCTGGAAA TGATCCGCCG CGCCCAACCG
CTGCCCAAGC CACCGGCCGA CATGCTGACC AATGGCGCGA TCGAAATCGT TGCGCCGTTT
GTGTACTCGC TGGAACGCCG CCGCTGA
 
Protein sequence
MITTRHKLTR YSGSLAVVLG VHALAIALAL NWTARPPIEL PPQAMMVELA PVPAPPPPAP 
PKVVTPPQPP APVEELPIPK LAEAPKAEIA VQKPKPKPKP KPPKPIEKKL PDPPKEKPSE
EKPADTQPTQ APTEKSAQPA PGPSPAQMAA KASWQGTLLA HLAKYKKYPA SAQARGKEGL
NRLRFVVDGE GNVLSFELVG RSGNADLDRA TLEMIRRAQP LPKPPADMLT NGAIEIVAPF
VYSLERRR