Gene Pfl01_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5366 
Symbol 
ID3714779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6026644 
End bp6027807 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_351094 
Protein GI77461587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCT CGCATTCAGA GCACCTCTCA ATGACACAAC ACAACGACTT GCTGATCGTC 
GGCGCCGGCA TCCTGGGCCT GTCCCACGCC TATGCCGCCG CCCGGCGCGG TCTCAAGGTC
ACGGTTTTCG AGCGCACCGC CACGCCACTC GGCGCTTCGG TGCGCAACTT CGGCCAGGCG
CTGGTCACCG GTCAGCCACC GGGTCCGATG CTCGAACTGG CCAAGGCCAG CCGCGAGATC
TGGGGTCAGT GGGCGCAGCT CGCCGGCCTG CAACTCAAGC GCAACGGCTC GTACCTGTTC
GCCCGCACCG AGGCCGAAGA GCACTTGCTC GAAGCGTTCT GCGCCGGGCG CGCCGTCGAG
CACGACTACC GCGTCGAGCT GCTGCGCGGT GCCGCGTTGC GCGATTTGTA CGGCGGTCAG
TTCAGCCATC ACCGCGCCGC GCTGCATGGC ATGGACGATC AGCAGCTGTA TTCCCGGGAA
GCGATTCCGG CGCTGATCGA ATACCTGCGT CGCGAACTCA AGGTCGAGTT TCACTTCTCC
ACGCTGGTGT GCGACGTCGA ACCGGGGCGC CTGCACAGCA CTGCCGGGAT CTTCTTCGCC
GAACAGATCA TCGTCTGCTC CGGCCACGAT TATCAGACCT TGCTGGCCGA GCCGATTGCC
GCCCTCGACC CGCAAATCTG CCGCCTGCAA ATGCTCCGCG TCCGGCCGCA GATCGACCTG
AACTTGCAAC ACGCCTTGCT CACAGGCCTC AGCTGCGTGC ATTACGGCGC CTTCGCTGAC
TTGCCGGAAG CCGCGGAAGT GCAGGCGCAA ATCCTGCGCG AACAACCGCA CCTGCAGGCA
AACGGCATTC ACCTGCTGAT CAGCCCGACA CCTTATGGCG AGCTGATCAT CGGCGATTCG
CACCATTACG GCAGCGATCC ATCACCGTTC AACGCCGAGC AGGTCGACAA CTGGATGCTC
GAACTGGCCG AGCAGACCCT CGGCTGCAAG GTGCAAGTGG TCGAGCGCTG GCAGGGTGTC
TATGGTTCCC GTGGTCCGGG GCCTTTTTCA TTCCTGCGTC CGGCGCCGGG GCTGAGTGTG
GCGCTGATGC ACAGCGGCGT CGGCATGAGC GTTGGCCCGG CCATGGCCGA GCGCAATGTT
GCACAGCTTT TTGGAGAGCG CTGA
 
Protein sequence
MAVSHSEHLS MTQHNDLLIV GAGILGLSHA YAAARRGLKV TVFERTATPL GASVRNFGQA 
LVTGQPPGPM LELAKASREI WGQWAQLAGL QLKRNGSYLF ARTEAEEHLL EAFCAGRAVE
HDYRVELLRG AALRDLYGGQ FSHHRAALHG MDDQQLYSRE AIPALIEYLR RELKVEFHFS
TLVCDVEPGR LHSTAGIFFA EQIIVCSGHD YQTLLAEPIA ALDPQICRLQ MLRVRPQIDL
NLQHALLTGL SCVHYGAFAD LPEAAEVQAQ ILREQPHLQA NGIHLLISPT PYGELIIGDS
HHYGSDPSPF NAEQVDNWML ELAEQTLGCK VQVVERWQGV YGSRGPGPFS FLRPAPGLSV
ALMHSGVGMS VGPAMAERNV AQLFGER